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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_4402 and EX28DRAFT_4403 are separated by 92 nucleotides
EX28DRAFT_4403 and EX28DRAFT_4404 are separated by 68 nucleotides
EX28DRAFT_4404 and EX28DRAFT_4405 are separated by 9 nucleotides
EX28DRAFT_4405 and EX28DRAFT_4406 are separated by 94 nucleotides
EX28DRAFT_4402: EX28DRAFT_4402 - regulator of ribonuclease activity A, at 64,636 to 65,121
_4402
EX28DRAFT_4403: EX28DRAFT_4403 - 1,4-dihydroxy-2-naphthoate prenyltransferase (EC 2.5.1.74), at 65,214 to 66,134
_4403
EX28DRAFT_4404: EX28DRAFT_4404 - ATP-dependent protease HslVU, ATPase subunit, at 66,203 to 67,537
_4404
EX28DRAFT_4405: EX28DRAFT_4405 - ATP-dependent protease HslVU, peptidase subunit, at 67,547 to 68,077
_4405
EX28DRAFT_4406: EX28DRAFT_4406 - cell division protein FtsN, at 68,172 to 69,065
_4406
Group
Condition
EX28DRAFT
_4402
EX28DRAFT
_4403
EX28DRAFT
_4404
EX28DRAFT
_4405
EX28DRAFT
_4406
stress
MS_media with arsenate 5 mM
-0.3
-0.5
+0.0
-2.5
-0.7
stress
MS_media with arsenate 5 mM
-0.6
-0.3
-0.1
-2.3
-0.8
no stress control
M9 with sucrose; no stress control
-0.1
+0.1
+0.2
-3.2
-0.1
stress
MS_media with arsenate 5 mM
-0.4
-0.3
-0.1
-0.8
-1.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.3
+0.5
-3.9
+1.6
stress
MS_media with arsenate 5 mM
-0.5
-0.3
+0.2
+0.0
-1.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
+0.1
+0.1
-1.8
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.0
-0.1
-2.0
+0.9
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.2
+0.1
-2.1
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.5
-0.0
+0.3
-3.0
+1.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.0
+0.3
-2.3
+1.0
stress
MS_media with m-arsenite 1 mM
-0.1
+0.3
+0.2
-0.2
-1.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.0
+0.0
-1.2
+0.2
stress
MS_media with m-arsenite 1 mM
+0.2
+0.2
+0.0
-0.4
-0.9
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.2
-0.6
-0.7
+1.0
stress
MS_media with m-arsenite 1 mM
-0.1
+0.2
+0.0
+0.3
-1.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.3
+0.1
+0.1
-1.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
-0.1
-0.5
-0.3
+0.2
stress
MS_media with arsenate 5 mM
-0.2
-0.3
+0.1
+1.3
-0.7
stress
MS_media with m-arsenite 1 mM
+0.3
+0.3
+0.2
+0.6
-1.1
stress
MS_media with m-arsenite 1 mM
+0.1
+0.4
-0.2
+0.7
-0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.1
-0.2
-0.1
+0.8
stress
MS_media with m-arsenite 1 mM
-0.1
+0.2
+0.2
+0.9
-0.9
no stress control
MS_media no stress control
+0.2
-0.1
+0.4
+0.5
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.1
+0.5
-0.9
+1.1
no stress control
MS_media no stress control
+0.0
+0.0
+0.3
+0.8
-0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.1
-0.1
+0.9
+0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
-0.1
+0.2
+1.2
+0.2
no stress control
M9 with sucrose; no stress control
+0.2
-0.0
-0.1
+1.2
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.1
+0.1
+0.3
+1.2
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