Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_4161 and EX28DRAFT_4162 overlap by 4 nucleotidesEX28DRAFT_4162 and EX28DRAFT_4163 are separated by 239 nucleotidesEX28DRAFT_4163 and EX28DRAFT_4164 are separated by 3 nucleotidesEX28DRAFT_4164 and EX28DRAFT_4165 are separated by 278 nucleotides EX28DRAFT_4161: EX28DRAFT_4161 - nitrite reductase [NAD(P)H], small subunit, at 141,724 to 142,050 _4161 EX28DRAFT_4162: EX28DRAFT_4162 - nitrite reductase [NAD(P)H], large subunit, at 142,047 to 144,590 _4162 EX28DRAFT_4163: EX28DRAFT_4163 - Cytosine deaminase and related metal-dependent hydrolases, at 144,830 to 146,146 _4163 EX28DRAFT_4164: EX28DRAFT_4164 - Major Facilitator Superfamily, at 146,150 to 147,334 _4164 EX28DRAFT_4165: EX28DRAFT_4165 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 147,613 to 148,185 _4165
Group Condition EX28DRAFT_4161 EX28DRAFT_4162 EX28DRAFT_4163 EX28DRAFT_4164 EX28DRAFT_4165
stress M9 with sucrose and trichloroethylene 76.3 uM -0.4 +0.0 -0.2 -0.1 -0.1
no stress control M9 with sucrose; no stress control -0.2 +0.2 -0.2 +0.2 -0.0
no stress control M9 with sucrose; no stress control -0.3 +0.2 -0.1 +0.2 -0.0
stress M9 with sucrose and trichloroethylene 76.3 uM -0.2 +0.3 -0.1 +0.1 -0.1
no stress control MS_media no stress control +0.4 -0.1 -0.2 +0.0 +0.0
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 +0.2 -0.3 +0.2 -0.1
stress MS_media with arsenate 5 mM +0.3 -0.1 -0.2 +0.0 +0.3
stress M9 with sucrose and trichloroethylene 76.3 uM -0.4 -0.0 +0.4 +0.1 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.1 -0.0 +0.4 +0.4 -0.6
no stress control MS_media no stress control +0.3 +0.0 -0.1 -0.1 +0.2
stress MS_media with m-arsenite 1 mM +0.2 -0.2 +0.1 +0.0 +0.3
stress MS_media with m-arsenite 1 mM +0.2 -0.1 -0.1 +0.0 +0.4
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.1 +0.2 +0.3 -0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.7 -0.1 -0.3 +0.3 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.4 +0.1 +0.1 +0.0 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM +0.1 +0.2 -0.1 +0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.8 -0.3 -0.1 +0.2 -0.2
stress M9 with casaminos and trichloroethylene 76.3 uM -0.1 +0.3 +0.2 +0.2 +0.0
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.5 +0.2 +0.4 -0.0 -0.4
stress MS_media with arsenate 5 mM +0.3 +0.0 -0.1 +0.1 +0.4
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.3 +0.0 +0.2 +0.2 -0.0
no stress control M9 with sucrose; no stress control +0.5 +0.1 -0.1 +0.1 +0.2
stress MS_media with arsenate 5 mM +0.2 +0.1 +0.1 +0.1 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.4 -0.1 +0.3 +0.2 +0.1
stress MS_media with arsenate 5 mM +0.8 -0.1 -0.3 +0.1 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.7 +0.0 +0.1 +0.1 -0.0
stress MS_media with arsenate 5 mM +0.3 +0.2 +0.0 +0.0 +0.5
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.6 +0.1 -0.0 +0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.2 +0.2 +0.4 +0.4 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.6 +0.1 +0.5 +0.4 +0.1
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