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Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_4135 and EX28DRAFT_4136 are separated by 8 nucleotides
EX28DRAFT_4136 and EX28DRAFT_4137 are separated by 88 nucleotides
EX28DRAFT_4137 and EX28DRAFT_4138 are separated by 232 nucleotides
EX28DRAFT_4138 and EX28DRAFT_4139 overlap by 4 nucleotides
EX28DRAFT_4135: EX28DRAFT_4135 - hypothetical protein, at 114,486 to 114,608
_4135
EX28DRAFT_4136: EX28DRAFT_4136 - Transcriptional accessory protein, at 114,617 to 116,947
_4136
EX28DRAFT_4137: EX28DRAFT_4137 - transcription elongation factor GreB, at 117,036 to 117,509
_4137
EX28DRAFT_4138: EX28DRAFT_4138 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 117,742 to 118,461
_4138
EX28DRAFT_4139: EX28DRAFT_4139 - Signal transduction histidine kinase, at 118,458 to 119,804
_4139
Group
Condition
EX28DRAFT
_4135
EX28DRAFT
_4136
EX28DRAFT
_4137
EX28DRAFT
_4138
EX28DRAFT
_4139
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.0
+0.1
-0.3
-0.2
-0.0
stress
MS_media with arsenate 5 mM
+0.1
-0.1
-0.4
-1.0
-0.0
stress
MS_media with m-arsenite 1 mM
-0.3
+0.1
-0.3
-0.5
-0.1
stress
MS_media with arsenate 5 mM
+0.8
-0.3
-0.1
-1.4
-0.2
stress
MS_media with arsenate 5 mM
+0.4
-0.4
-0.2
-0.6
-0.3
stress
MS_media with arsenate 5 mM
+0.3
-0.1
-0.3
-0.6
-0.1
stress
MS_media with m-arsenite 1 mM
+0.3
+0.1
-0.1
-0.6
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.1
+0.1
-0.3
+0.6
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-0.4
-0.1
+0.3
+0.6
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.8
+0.2
-0.1
+0.2
+0.4
stress
MS_media with arsenate 5 mM
+1.0
-0.4
-0.2
-0.6
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.2
-0.1
-0.1
+0.7
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.4
-0.1
-0.7
+0.0
+0.3
stress
MS_media with arsenate 5 mM
+0.9
+0.1
-0.3
-0.6
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.2
+0.1
+0.3
+0.4
+0.5
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.6
+0.2
+0.1
+0.1
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.9
+0.0
+0.2
+0.5
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.2
-0.4
+0.7
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.9
+0.2
+0.1
+0.9
+0.3
no stress control
M9 with sucrose; no stress control
-0.3
-0.1
+0.3
+0.4
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.3
+0.3
+0.4
+1.1
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.2
+0.1
+0.7
+0.3
no stress control
M9 with sucrose; no stress control
+0.4
+0.1
+0.1
+0.5
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.7
+0.1
+0.0
+0.6
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+1.2
-0.1
-0.2
+0.3
+0.3
no stress control
M9 with sucrose; no stress control
+1.0
+0.2
+0.3
-0.1
+0.4
no stress control
M9 with sucrose; no stress control
+0.7
+0.3
+0.0
+0.5
+0.3
no stress control
M9 with sucrose; no stress control
+0.8
+0.1
-0.0
+0.6
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
+1.2
+0.3
+0.0
+0.5
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.2
+0.4
+0.6
+0.6
+0.3
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