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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_4125 and EX28DRAFT_4126 are separated by 9 nucleotides
EX28DRAFT_4126 and EX28DRAFT_4127 are separated by 67 nucleotides
EX28DRAFT_4127 and EX28DRAFT_4128 are separated by 385 nucleotides
EX28DRAFT_4128 and EX28DRAFT_4129 are separated by 61 nucleotides
EX28DRAFT_4125: EX28DRAFT_4125 - glycogen/starch/alpha-glucan phosphorylases, at 102,660 to 105,053
_4125
EX28DRAFT_4126: EX28DRAFT_4126 - 4-alpha-glucanotransferase, at 105,063 to 107,141
_4126
EX28DRAFT_4127: EX28DRAFT_4127 - gluconate transporter, at 107,209 to 108,525
_4127
EX28DRAFT_4128: EX28DRAFT_4128 - IscR-regulated protein YhgI, at 108,911 to 109,486
_4128
EX28DRAFT_4129: EX28DRAFT_4129 - Predicted amidophosphoribosyltransferases, at 109,548 to 110,231
_4129
Group
Condition
EX28DRAFT
_4125
EX28DRAFT
_4126
EX28DRAFT
_4127
EX28DRAFT
_4128
EX28DRAFT
_4129
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.1
-0.1
N.D.
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.4
+0.0
N.D.
-0.0
no stress control
M9 with sucrose; no stress control
-0.2
-0.0
-0.2
N.D.
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.3
-0.1
N.D.
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
+0.0
-0.2
N.D.
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.1
-0.4
N.D.
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.1
-0.3
N.D.
-0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.0
-0.0
-0.0
N.D.
-0.3
stress
MS_media with m-arsenite 1 mM
-0.1
+0.2
-0.1
N.D.
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.0
+0.0
-0.3
N.D.
-0.1
stress
MS_media with arsenate 5 mM
+0.0
+0.1
-0.1
N.D.
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.0
-0.4
N.D.
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.1
-0.2
N.D.
-0.0
stress
MS_media with arsenate 5 mM
+0.1
+0.2
-0.0
N.D.
-0.5
stress
MS_media with m-arsenite 1 mM
-0.1
+0.0
+0.1
N.D.
-0.2
no stress control
MS_media no stress control
-0.1
+0.1
+0.0
N.D.
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
+0.1
-0.1
N.D.
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.3
-0.1
N.D.
+0.4
no stress control
M9 with sucrose; no stress control
-0.1
+0.1
-0.0
N.D.
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.0
+0.1
N.D.
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.1
+0.1
N.D.
-0.2
stress
MS_media with m-arsenite 1 mM
-0.1
-0.0
+0.3
N.D.
-0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
+0.0
+0.0
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.0
-0.1
N.D.
+0.3
stress
MS_media with arsenate 5 mM
-0.0
+0.2
+0.1
N.D.
-0.1
no stress control
M9 with sucrose; no stress control
+0.1
+0.1
-0.1
N.D.
+0.1
stress
MS_media with arsenate 5 mM
-0.1
+0.1
+0.1
N.D.
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
+0.2
-0.1
N.D.
+0.1
stress
MS_media with m-arsenite 1 mM
+0.1
+0.1
+0.1
N.D.
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
-0.2
+0.2
N.D.
+0.1
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