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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3925 and EX28DRAFT_3926 are separated by 145 nucleotides
EX28DRAFT_3926 and EX28DRAFT_3927 are separated by 21 nucleotides
EX28DRAFT_3927 and EX28DRAFT_3928 are separated by 112 nucleotides
EX28DRAFT_3928 and EX28DRAFT_3929 are separated by 26 nucleotides
EX28DRAFT_3925: EX28DRAFT_3925 - Uncharacterized conserved protein, at 134,223 to 135,182
_3925
EX28DRAFT_3926: EX28DRAFT_3926 - Predicted ATPase, at 135,328 to 136,416
_3926
EX28DRAFT_3927: EX28DRAFT_3927 - hypothetical protein, at 136,438 to 136,686
_3927
EX28DRAFT_3928: EX28DRAFT_3928 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 136,799 to 137,752
_3928
EX28DRAFT_3929: EX28DRAFT_3929 - Predicted Zn-dependent hydrolases of the beta-lactamase fold, at 137,779 to 138,558
_3929
Group
Condition
EX28DRAFT
_3925
EX28DRAFT
_3926
EX28DRAFT
_3927
EX28DRAFT
_3928
EX28DRAFT
_3929
no stress control
M9 with sucrose; no stress control
-0.0
-0.2
-0.5
+0.1
-1.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
-0.3
-0.3
-0.1
-0.6
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-0.6
-0.4
-0.1
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-0.1
-0.6
-0.1
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
-0.1
-0.3
-0.1
-0.9
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.2
-0.4
+0.0
-0.6
no stress control
M9 with sucrose; no stress control
+0.1
-0.2
-0.3
-0.1
-0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
-0.2
-0.3
-0.0
-0.3
no stress control
M9 with sucrose; no stress control
+0.1
-0.1
-0.8
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.1
-0.9
+0.4
+0.0
no stress control
MS_media no stress control
+0.2
-0.3
-0.3
-0.1
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
-0.4
-0.3
-0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
-0.0
-0.7
+0.0
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
-0.3
-0.5
+0.4
-0.3
no stress control
M9 with sucrose; no stress control
+0.3
-0.2
+0.1
-0.2
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.2
-0.6
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.1
-0.4
+0.0
+0.4
stress
MS_media with m-arsenite 1 mM
+0.3
-0.1
-0.3
+0.1
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
-0.2
-0.4
+0.1
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.4
+0.2
-0.5
+0.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
-0.2
-0.5
-0.0
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
+0.0
-0.5
-0.1
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.4
-0.4
+0.3
+0.2
stress
MS_media with m-arsenite 1 mM
+0.5
-0.2
-0.2
+0.1
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
+0.2
-0.3
-0.0
+0.4
stress
MS_media with arsenate 5 mM
+0.1
+0.0
-0.3
+0.1
+0.5
stress
MS_media with arsenate 5 mM
+0.2
+0.1
-0.3
-0.0
+0.6
stress
MS_media with arsenate 5 mM
+0.3
+0.1
-0.1
+0.2
+0.5
stress
MS_media with arsenate 5 mM
+0.4
-0.1
+0.1
+0.1
+0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+1.2
+0.7
+0.5
-0.2
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