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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3878 and EX28DRAFT_3879 overlap by 4 nucleotides
EX28DRAFT_3879 and EX28DRAFT_3880 are separated by 2 nucleotides
EX28DRAFT_3880 and EX28DRAFT_3881 are separated by 11 nucleotides
EX28DRAFT_3881 and EX28DRAFT_3882 are separated by 66 nucleotides
EX28DRAFT_3878: EX28DRAFT_3878 - lipopolysaccharide heptosyltransferase III, putative, at 88,314 to 89,384
_3878
EX28DRAFT_3879: EX28DRAFT_3879 - Glycosyltransferase, at 89,381 to 90,508
_3879
EX28DRAFT_3880: EX28DRAFT_3880 - Glycosyltransferase, at 90,511 to 91,611
_3880
EX28DRAFT_3881: EX28DRAFT_3881 - Glycosyltransferases involved in cell wall biogenesis, at 91,623 to 92,612
_3881
EX28DRAFT_3882: EX28DRAFT_3882 - 3-deoxy-D-manno-octulosonic-acid transferase, at 92,679 to 93,953
_3882
Group
Condition
EX28DRAFT
_3878
EX28DRAFT
_3879
EX28DRAFT
_3880
EX28DRAFT
_3881
EX28DRAFT
_3882
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.0
-5.6
-0.7
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.4
-3.6
-0.5
+0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
-3.6
-0.4
+0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.3
-2.3
-0.2
-0.1
N.D.
no stress control
MS_media no stress control
-0.6
-1.5
-0.7
-0.0
N.D.
stress
MS_media with m-arsenite 1 mM
-0.7
-2.0
-0.2
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-2.1
-0.5
+0.0
N.D.
no stress control
MS_media no stress control
-0.2
-1.7
-0.7
+0.0
N.D.
stress
MS_media with m-arsenite 1 mM
-0.8
-1.9
+0.2
+0.0
N.D.
no stress control
MS_media no stress control
-0.5
-1.3
-0.5
-0.1
N.D.
stress
MS_media with arsenate 5 mM
-0.7
-1.2
-0.6
+0.0
N.D.
stress
MS_media with m-arsenite 1 mM
-0.8
-1.4
+0.1
-0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-1.8
+0.2
-0.0
N.D.
stress
MS_media with m-arsenite 1 mM
-0.6
-1.7
+0.1
+0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.4
-0.8
+0.4
-0.0
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
-2.0
+0.6
+0.0
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
-2.0
+0.6
-0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
-2.0
+0.5
-0.2
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
-1.9
+0.7
+0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.5
-1.7
+0.7
-0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
-1.8
+0.7
-0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.9
-1.1
+0.3
+0.3
N.D.
no stress control
M9 with sucrose; no stress control
-0.2
-1.8
+0.7
-0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
-1.7
+0.6
-0.0
N.D.
no stress control
M9 with sucrose; no stress control
-0.1
-1.7
+0.6
-0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
-1.3
+0.6
-0.3
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-1.7
+0.5
+0.1
N.D.
no stress control
M9 with sucrose; no stress control
+0.1
-1.8
+0.8
-0.1
N.D.
no stress control
M9 with sucrose; no stress control
-0.3
-1.3
+0.7
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.8
+1.3
-0.1
N.D.
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