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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3870 and EX28DRAFT_3871 are separated by 215 nucleotides
EX28DRAFT_3871 and EX28DRAFT_3872 are separated by 2 nucleotides
EX28DRAFT_3872 and EX28DRAFT_3873 are separated by 3 nucleotides
EX28DRAFT_3873 and EX28DRAFT_3874 are separated by 3 nucleotides
EX28DRAFT_3870: EX28DRAFT_3870 - 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29), at 79,573 to 80,769
_3870
EX28DRAFT_3871: EX28DRAFT_3871 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 80,985 to 81,917
_3871
EX28DRAFT_3872: EX28DRAFT_3872 - lipopolysaccharide heptosyltransferase II, at 81,920 to 82,966
_3872
EX28DRAFT_3873: EX28DRAFT_3873 - lipopolysaccharide heptosyltransferase I, at 82,970 to 83,953
_3873
EX28DRAFT_3874: EX28DRAFT_3874 - ADP-heptose:LPS heptosyltransferase, at 83,957 to 85,066
_3874
Group
Condition
EX28DRAFT
_3870
EX28DRAFT
_3871
EX28DRAFT
_3872
EX28DRAFT
_3873
EX28DRAFT
_3874
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
N.D.
N.D.
N.D.
-1.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.0
N.D.
N.D.
N.D.
-1.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.5
N.D.
N.D.
N.D.
-1.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
N.D.
N.D.
N.D.
-0.9
no stress control
MS_media no stress control
-0.2
N.D.
N.D.
N.D.
-0.3
no stress control
MS_media no stress control
-0.2
N.D.
N.D.
N.D.
-0.3
no stress control
MS_media no stress control
-0.1
N.D.
N.D.
N.D.
-0.4
no stress control
MS_media no stress control
-0.2
N.D.
N.D.
N.D.
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
N.D.
N.D.
N.D.
-0.3
no stress control
MS_media no stress control
+0.1
N.D.
N.D.
N.D.
-0.4
no stress control
MS_media no stress control
+0.2
N.D.
N.D.
N.D.
-0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
N.D.
N.D.
N.D.
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
N.D.
N.D.
N.D.
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
N.D.
N.D.
N.D.
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
N.D.
N.D.
N.D.
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
N.D.
N.D.
N.D.
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
N.D.
N.D.
N.D.
-0.4
no stress control
M9 with sucrose; no stress control
-0.2
N.D.
N.D.
N.D.
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
N.D.
N.D.
N.D.
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
N.D.
N.D.
N.D.
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
N.D.
N.D.
N.D.
+0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
N.D.
N.D.
N.D.
+0.2
no stress control
M9 with sucrose; no stress control
+0.3
N.D.
N.D.
N.D.
+0.3
no stress control
M9 with sucrose; no stress control
+0.3
N.D.
N.D.
N.D.
+0.2
no stress control
M9 with sucrose; no stress control
+0.2
N.D.
N.D.
N.D.
+0.4
no stress control
M9 with sucrose; no stress control
+0.3
N.D.
N.D.
N.D.
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.5
N.D.
N.D.
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
N.D.
N.D.
N.D.
+0.5
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.6
N.D.
N.D.
N.D.
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
N.D.
N.D.
N.D.
+1.3
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