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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3867 and EX28DRAFT_3868 are separated by 15 nucleotides
EX28DRAFT_3868 and EX28DRAFT_3869 are separated by 27 nucleotides
EX28DRAFT_3869 and EX28DRAFT_3870 are separated by 9 nucleotides
EX28DRAFT_3870 and EX28DRAFT_3871 are separated by 215 nucleotides
EX28DRAFT_3867: EX28DRAFT_3867 - Glycosyl transferases group 1, at 76,372 to 77,577
_3867
EX28DRAFT_3868: EX28DRAFT_3868 - hypothetical protein, at 77,593 to 78,507
_3868
EX28DRAFT_3869: EX28DRAFT_3869 - L-threonine 3-dehydrogenase (EC 1.1.1.103), at 78,535 to 79,563
_3869
EX28DRAFT_3870: EX28DRAFT_3870 - 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29), at 79,573 to 80,769
_3870
EX28DRAFT_3871: EX28DRAFT_3871 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 80,985 to 81,917
_3871
Group
Condition
EX28DRAFT
_3867
EX28DRAFT
_3868
EX28DRAFT
_3869
EX28DRAFT
_3870
EX28DRAFT
_3871
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
+0.1
-0.2
-0.3
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
-0.0
-0.3
-0.4
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
+0.1
-0.1
-0.4
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.7
-0.0
-0.3
+0.5
N.D.
no stress control
M9 with sucrose; no stress control
-0.1
+0.1
-0.2
-0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.0
+0.1
-0.4
-0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.3
-0.2
-0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+0.2
-0.5
-0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+0.1
-0.6
-0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.2
-0.3
-0.1
N.D.
stress
MS_media with m-arsenite 1 mM
+0.2
-0.2
+0.2
-0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.3
-0.3
-0.2
N.D.
no stress control
M9 with sucrose; no stress control
-0.3
+0.1
+0.1
+0.2
N.D.
no stress control
M9 with sucrose; no stress control
-0.4
+0.2
+0.0
+0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.0
+0.2
-0.5
+0.4
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.0
+0.0
-0.3
+0.5
N.D.
no stress control
M9 with sucrose; no stress control
-0.1
+0.1
-0.1
+0.3
N.D.
no stress control
M9 with sucrose; no stress control
-0.2
+0.2
-0.1
+0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.2
-0.3
+0.3
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.3
+0.1
-0.1
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.4
-0.4
+0.2
N.D.
stress
MS_media with arsenate 5 mM
+0.2
+0.0
+0.4
-0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.3
-0.3
+0.3
N.D.
stress
MS_media with m-arsenite 1 mM
+0.2
+0.2
+0.1
+0.1
N.D.
stress
MS_media with m-arsenite 1 mM
+0.1
+0.0
+0.2
+0.3
N.D.
stress
MS_media with arsenate 5 mM
+0.2
+0.1
+0.3
+0.1
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
+0.1
-0.0
+0.6
N.D.
stress
MS_media with m-arsenite 1 mM
-0.0
-0.0
+0.7
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.8
+0.7
-0.5
+0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+1.1
-0.5
+0.4
N.D.
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