Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_3830 and EX28DRAFT_3831 are separated by 308 nucleotidesEX28DRAFT_3831 and EX28DRAFT_3832 are separated by 72 nucleotidesEX28DRAFT_3832 and EX28DRAFT_3833 overlap by 23 nucleotidesEX28DRAFT_3833 and EX28DRAFT_3834 are separated by 33 nucleotides EX28DRAFT_3830: EX28DRAFT_3830 - xylose isomerase, at 34,349 to 35,734 _3830 EX28DRAFT_3831: EX28DRAFT_3831 - D-xylose ABC transporter, substrate-binding protein, at 36,043 to 37,035 _3831 EX28DRAFT_3832: EX28DRAFT_3832 - D-xylose ABC transporter, ATP-binding protein, at 37,108 to 38,649 _3832 EX28DRAFT_3833: EX28DRAFT_3833 - ABC-type xylose transport system, permease component, at 38,627 to 39,808 _3833 EX28DRAFT_3834: EX28DRAFT_3834 - Transcriptional regulators, at 39,842 to 41,020 _3834
Group Condition EX28DRAFT_3830 EX28DRAFT_3831 EX28DRAFT_3832 EX28DRAFT_3833 EX28DRAFT_3834
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -1.2 -0.1 +0.0 +0.6 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 +0.1 -0.1 +0.2 -0.2
stress M9 with casaminos and trichloroethylene 76.3 uM -0.0 -0.2 +0.1 +0.0 -0.2
stress M9 with sucrose and trichloroethylene 76.3 uM -0.1 -0.2 +0.1 +0.1 -0.1
stress MS_media with arsenate 5 mM -0.3 -0.2 -0.0 +0.2 +0.1
stress MS_media with m-arsenite 1 mM -0.1 +0.1 -0.2 +0.1 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.2 +0.0 +0.1 +0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.7 -0.1 +0.0 +0.5 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.5 +0.2 +0.1 +0.0 +0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.1 -0.2 +0.1 +0.2 -0.1
no stress control MS_media no stress control +0.1 +0.2 -0.2 +0.1 -0.4
no stress control M9 with sucrose; no stress control -0.1 -0.1 -0.1 +0.1 +0.2
stress MS_media with m-arsenite 1 mM -0.2 +0.1 -0.2 +0.1 +0.0
no stress control M9 with sucrose; no stress control -0.1 -0.2 -0.1 +0.0 +0.2
stress M9 with sucrose and trichloroethylene 76.3 uM -0.1 +0.2 -0.0 -0.2 +0.0
stress MS_media with m-arsenite 1 mM -0.2 +0.2 -0.1 +0.1 -0.1
stress MS_media with arsenate 5 mM -0.2 +0.2 -0.0 +0.1 -0.0
stress M9 with casaminos and trichloroethylene 76.3 uM -0.2 -0.1 +0.2 +0.2 -0.1
stress MS_media with arsenate 5 mM -0.1 -0.1 -0.1 +0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.2 +0.2 +0.2 -0.0 -0.1
stress MS_media with m-arsenite 1 mM -0.0 -0.2 -0.1 +0.1 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.1 -0.1 -0.1 +0.2 +0.2
stress M9 with casaminos and trichloroethylene 76.3 uM -0.1 -0.1 +0.1 +0.2 +0.0
stress MS_media with arsenate 5 mM -0.3 +0.2 -0.0 +0.1 +0.2
no stress control M9 with sucrose; no stress control -0.1 -0.2 +0.0 +0.1 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.3 -0.1 +0.0 +0.2 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 +0.5 -0.1 +0.5 -0.2
stress M9 with sucrose and trichloroethylene 76.3 uM -0.0 +0.0 +0.3 +0.3 -0.2
stress M9 with sucrose and trichloroethylene 76.3 uM +0.0 +0.3 -0.1 -0.0 +0.2
stress M9 with casaminos and trichloroethylene 76.3 uM +0.0 +0.1 +0.3 +0.0 +0.1
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