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Fitness for 4 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3785 and EX28DRAFT_3786 are separated by 40 nucleotides
EX28DRAFT_3786 and EX28DRAFT_3787 overlap by 8 nucleotides
EX28DRAFT_3787 and EX28DRAFT_3788 are separated by 188 nucleotides
EX28DRAFT_3785: EX28DRAFT_3785 - lipoprotein, YaeC family, at 466,548 to 467,363
_3785
EX28DRAFT_3786: EX28DRAFT_3786 - ABC-type metal ion transport system, permease component, at 467,404 to 468,057
_3786
EX28DRAFT_3787: EX28DRAFT_3787 - D-methionine ABC transporter, ATP-binding protein, at 468,050 to 469,081
_3787
EX28DRAFT_3788: EX28DRAFT_3788 - D,D-heptose 1,7-bisphosphate phosphatase, at 469,270 to 469,836
_3788
Group
Condition
EX28DRAFT
_3785
EX28DRAFT
_3786
EX28DRAFT
_3787
EX28DRAFT
_3788
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.7
-0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.3
-0.5
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.2
-0.7
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.6
-0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.5
-0.2
-0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-0.1
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.2
-0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.1
-0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.1
+0.1
N.D.
stress
MS_media with arsenate 5 mM
+0.2
-0.2
-0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.3
+0.2
+0.2
N.D.
stress
MS_media with arsenate 5 mM
+0.4
-0.1
-0.1
N.D.
stress
MS_media with m-arsenite 1 mM
-0.0
+0.4
+0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.1
+0.3
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.2
+0.2
N.D.
no stress control
M9 with sucrose; no stress control
+0.0
+0.1
+0.4
N.D.
no stress control
M9 with sucrose; no stress control
+0.2
+0.0
+0.4
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
+0.1
+0.4
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.0
+0.3
+0.3
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.1
+0.4
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.3
+0.0
+0.4
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.3
+0.3
+0.2
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.3
+0.4
N.D.
no stress control
M9 with sucrose; no stress control
+0.2
+0.2
+0.5
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.3
+0.2
+0.4
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.2
+0.5
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
+0.2
+0.3
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
+0.2
+0.5
N.D.
no stress control
M9 with sucrose; no stress control
+0.2
+0.3
+0.5
N.D.
no stress control
M9 with sucrose; no stress control
+0.3
+0.4
+0.5
N.D.
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