Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_3782 and EX28DRAFT_3783 are separated by 113 nucleotidesEX28DRAFT_3783 and EX28DRAFT_3784 overlap by 4 nucleotidesEX28DRAFT_3784 and EX28DRAFT_3785 are separated by 106 nucleotidesEX28DRAFT_3785 and EX28DRAFT_3786 are separated by 40 nucleotides EX28DRAFT_3782: EX28DRAFT_3782 - prolyl-tRNA synthetase (EC 6.1.1.15), at 463,501 to 465,219 _3782 EX28DRAFT_3783: EX28DRAFT_3783 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA, at 465,333 to 466,040 _3783 EX28DRAFT_3784: EX28DRAFT_3784 - hypothetical protein, at 466,037 to 466,441 _3784 EX28DRAFT_3785: EX28DRAFT_3785 - lipoprotein, YaeC family, at 466,548 to 467,363 _3785 EX28DRAFT_3786: EX28DRAFT_3786 - ABC-type metal ion transport system, permease component, at 467,404 to 468,057 _3786
Group Condition EX28DRAFT_3782 EX28DRAFT_3783 EX28DRAFT_3784 EX28DRAFT_3785 EX28DRAFT_3786
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours N.D. -0.6 -0.3 -0.1 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM N.D. -0.5 -0.1 -0.2 +0.0
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. -0.2 +0.3 -0.2 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. +0.1 +0.4 -0.6 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM N.D. +0.0 -0.6 +0.3 +0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. -0.1 +0.4 -0.3 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours N.D. -0.0 +0.5 -0.5 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. -0.0 +0.3 -0.5 +0.1
stress M9 with casaminos and trichloroethylene 76.3 uM N.D. +0.1 -0.5 +0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. -0.1 +0.8 -0.5 -0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours N.D. -0.2 +0.3 -0.3 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. -0.3 +0.6 -0.4 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. +0.7 +0.1 -0.2 -0.6
no stress control MS_media no stress control N.D. +0.3 -0.1 -0.2 +0.1
no stress control M9 with sucrose; no stress control N.D. -0.0 -0.4 +0.2 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. -0.2 +0.7 -0.4 -0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours N.D. -0.0 +0.3 -0.3 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. +0.3 +1.0 -0.5 -0.7
stress M9 with casaminos and trichloroethylene 76.3 uM N.D. -0.3 -0.1 +0.4 +0.2
stress MS_media with arsenate 5 mM N.D. +0.2 +0.2 +0.2 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days N.D. +0.0 +0.6 -0.2 -0.1
stress MS_media with arsenate 5 mM N.D. +0.3 +0.3 +0.2 -0.2
stress M9 with casaminos and trichloroethylene 76.3 uM N.D. -0.0 +0.3 +0.1 +0.2
stress M9 with casaminos and trichloroethylene 76.3 uM N.D. +0.1 -0.1 +0.3 +0.3
stress MS_media with m-arsenite 1 mM N.D. +0.0 +0.2 -0.0 +0.4
stress MS_media with arsenate 5 mM N.D. +0.0 +0.5 +0.3 -0.1
no stress control M9 with sucrose; no stress control N.D. +0.3 -0.2 +0.3 +0.4
stress M9 with casaminos and trichloroethylene 76.3 uM N.D. +0.2 +0.1 +0.3 +0.2
stress MS_media with arsenate 5 mM N.D. +0.2 +0.4 +0.4 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM N.D. +0.0 +0.8 +0.2 +0.2
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