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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3748 and EX28DRAFT_3749 are separated by 82 nucleotides
EX28DRAFT_3749 and EX28DRAFT_3750 are separated by 131 nucleotides
EX28DRAFT_3750 and EX28DRAFT_3751 are separated by 146 nucleotides
EX28DRAFT_3751 and EX28DRAFT_3752 are separated by 92 nucleotides
EX28DRAFT_3748: EX28DRAFT_3748 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 427,131 to 427,829
_3748
EX28DRAFT_3749: EX28DRAFT_3749 - deoxyguanosinetriphosphate triphosphohydrolase, putative, at 427,912 to 429,426
_3749
EX28DRAFT_3750: EX28DRAFT_3750 - periplasmic serine protease, Do/DeqQ family, at 429,558 to 430,994
_3750
EX28DRAFT_3751: EX28DRAFT_3751 - Sugar diacid utilization regulator, at 431,141 to 432,298
_3751
EX28DRAFT_3752: EX28DRAFT_3752 - Protein of unknown function (DUF3461), at 432,391 to 432,777
_3752
Group
Condition
EX28DRAFT
_3748
EX28DRAFT
_3749
EX28DRAFT
_3750
EX28DRAFT
_3751
EX28DRAFT
_3752
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
-0.1
-0.2
-0.0
-0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.1
+0.1
-0.1
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.1
-0.4
+0.2
-0.1
no stress control
M9 with sucrose; no stress control
N.D.
-0.2
+0.1
+0.2
-0.5
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.2
+0.3
-0.5
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.1
+0.3
+0.1
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.1
-0.5
-0.3
+0.6
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
+0.0
+0.3
-0.2
+0.1
stress
MS_media with arsenate 5 mM
N.D.
+0.0
-0.2
+0.0
+0.3
stress
MS_media with m-arsenite 1 mM
N.D.
+0.2
-0.0
-0.2
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
-0.1
-0.2
+0.4
+0.3
stress
MS_media with arsenate 5 mM
N.D.
+0.2
-0.1
-0.2
+0.7
no stress control
MS_media no stress control
N.D.
+0.0
-0.2
+0.0
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
-0.1
-0.2
+0.3
+0.6
stress
MS_media with arsenate 5 mM
N.D.
+0.0
-0.0
+0.2
+0.3
no stress control
MS_media no stress control
N.D.
+0.2
-0.1
+0.1
+0.3
no stress control
MS_media no stress control
N.D.
+0.2
+0.1
-0.1
+0.4
stress
MS_media with m-arsenite 1 mM
N.D.
+0.2
-0.1
+0.0
+0.5
stress
MS_media with arsenate 5 mM
N.D.
+0.1
-0.1
+0.2
+0.5
stress
MS_media with m-arsenite 1 mM
N.D.
+0.1
-0.2
+0.2
+0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.0
+0.2
+0.4
+0.2
no stress control
MS_media no stress control
N.D.
+0.2
+0.0
+0.0
+0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.0
+0.3
+0.2
+0.3
stress
MS_media with arsenate 5 mM
N.D.
+0.1
-0.1
+0.2
+0.6
no stress control
MS_media no stress control
N.D.
+0.2
-0.1
+0.3
+0.4
stress
MS_media with arsenate 5 mM
N.D.
+0.2
+0.0
+0.0
+0.6
stress
MS_media with m-arsenite 1 mM
N.D.
+0.2
-0.1
+0.0
+0.8
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.2
+0.3
+0.3
+0.5
no stress control
M9 with sucrose; no stress control
N.D.
-0.0
+0.2
+0.3
+0.6
stress
MS_media with m-arsenite 1 mM
N.D.
+0.3
+0.0
+0.3
+0.5
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