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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3742 and EX28DRAFT_3743 are separated by 93 nucleotides
EX28DRAFT_3743 and EX28DRAFT_3744 are separated by 177 nucleotides
EX28DRAFT_3744 and EX28DRAFT_3745 are separated by 79 nucleotides
EX28DRAFT_3745 and EX28DRAFT_3746 are separated by 71 nucleotides
EX28DRAFT_3742: EX28DRAFT_3742 - ABC-type Fe3+-siderophore transport system, permease component, at 420,254 to 422,236
_3742
EX28DRAFT_3743: EX28DRAFT_3743 - glutamate-1-semialdehyde-2,1-aminomutase, at 422,330 to 423,610
_3743
EX28DRAFT_3744: EX28DRAFT_3744 - Chloride channel protein EriC, at 423,788 to 425,188
_3744
EX28DRAFT_3745: EX28DRAFT_3745 - Iron-sulfur cluster assembly accessory protein, at 425,268 to 425,615
_3745
EX28DRAFT_3746: EX28DRAFT_3746 - Predicted membrane protein, at 425,687 to 426,310
_3746
Group
Condition
EX28DRAFT
_3742
EX28DRAFT
_3743
EX28DRAFT
_3744
EX28DRAFT
_3745
EX28DRAFT
_3746
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
N.D.
-0.2
N.D.
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
N.D.
+0.2
N.D.
-0.6
stress
MS_media with arsenate 5 mM
+0.0
N.D.
+0.1
N.D.
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
N.D.
-0.3
N.D.
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
N.D.
+0.1
N.D.
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
N.D.
-0.1
N.D.
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
N.D.
+0.1
N.D.
+0.4
stress
MS_media with arsenate 5 mM
-0.0
N.D.
+0.3
N.D.
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
N.D.
+0.1
N.D.
+0.3
no stress control
M9 with sucrose; no stress control
+0.1
N.D.
-0.0
N.D.
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.4
N.D.
+0.1
N.D.
+0.2
no stress control
M9 with sucrose; no stress control
-0.2
N.D.
-0.0
N.D.
+0.9
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
N.D.
+0.3
N.D.
+0.6
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
N.D.
+0.2
N.D.
+0.4
stress
MS_media with arsenate 5 mM
+0.2
N.D.
+0.2
N.D.
+0.4
no stress control
M9 with sucrose; no stress control
-0.0
N.D.
+0.4
N.D.
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.0
N.D.
+0.4
N.D.
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.4
N.D.
+0.1
N.D.
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
N.D.
+0.2
N.D.
+0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
N.D.
+0.3
N.D.
+0.5
no stress control
M9 with sucrose; no stress control
+0.2
N.D.
+0.4
N.D.
+0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
N.D.
+0.5
N.D.
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
N.D.
+0.2
N.D.
+0.7
no stress control
M9 with sucrose; no stress control
-0.1
N.D.
+0.3
N.D.
+0.9
stress
MS_media with m-arsenite 1 mM
+0.1
N.D.
-0.4
N.D.
+1.5
stress
MS_media with m-arsenite 1 mM
-0.1
N.D.
-0.1
N.D.
+1.4
stress
MS_media with m-arsenite 1 mM
+0.3
N.D.
-0.1
N.D.
+1.4
stress
MS_media with m-arsenite 1 mM
+0.2
N.D.
+0.0
N.D.
+1.6
stress
MS_media with m-arsenite 1 mM
+0.1
N.D.
+0.3
N.D.
+1.5
stress
MS_media with m-arsenite 1 mM
+0.2
N.D.
+0.1
N.D.
+1.6
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