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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3719 and EX28DRAFT_3720 are separated by 67 nucleotides
EX28DRAFT_3720 and EX28DRAFT_3721 are separated by 136 nucleotides
EX28DRAFT_3721 and EX28DRAFT_3722 are separated by 208 nucleotides
EX28DRAFT_3722 and EX28DRAFT_3723 are separated by 61 nucleotides
EX28DRAFT_3719: EX28DRAFT_3719 - Bacterial chaperone lipoprotein (PulS_OutS), at 394,196 to 394,582
_3719
EX28DRAFT_3720: EX28DRAFT_3720 - Putative multicopper oxidases, at 394,650 to 396,257
_3720
EX28DRAFT_3721: EX28DRAFT_3721 - membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family, at 396,394 to 398,784
_3721
EX28DRAFT_3722: EX28DRAFT_3722 - hypoxanthine phosphoribosyltransferase, at 398,993 to 399,529
_3722
EX28DRAFT_3723: EX28DRAFT_3723 - Carbonic anhydrase, at 399,591 to 400,253
_3723
Group
Condition
EX28DRAFT
_3719
EX28DRAFT
_3720
EX28DRAFT
_3721
EX28DRAFT
_3722
EX28DRAFT
_3723
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.6
+0.1
+0.1
N.D.
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.1
-0.7
+0.0
N.D.
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.2
+0.3
-0.2
N.D.
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.3
+0.6
-0.0
N.D.
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.8
+0.2
+0.1
N.D.
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.1
+0.1
N.D.
-0.3
no stress control
M9 with sucrose; no stress control
-0.3
-0.3
+0.1
N.D.
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.0
+0.6
-0.2
N.D.
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.1
-0.1
N.D.
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.5
-0.0
+0.1
N.D.
-0.2
stress
MS_media with m-arsenite 1 mM
-0.7
-0.2
+0.1
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.8
+0.2
+0.0
N.D.
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
+0.2
+0.0
N.D.
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.6
+0.2
+0.0
N.D.
-0.1
stress
MS_media with m-arsenite 1 mM
-0.5
-0.3
+0.2
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.8
+0.5
+0.1
N.D.
-0.1
stress
MS_media with m-arsenite 1 mM
-0.8
-0.0
+0.2
N.D.
+0.4
stress
MS_media with arsenate 5 mM
+0.2
-0.2
-0.1
N.D.
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
+0.4
+0.1
N.D.
-0.1
stress
MS_media with m-arsenite 1 mM
-0.5
-0.1
+0.2
N.D.
+0.3
stress
MS_media with m-arsenite 1 mM
-0.3
-0.2
+0.1
N.D.
+0.3
stress
MS_media with arsenate 5 mM
+0.8
-0.1
-0.1
N.D.
-0.5
no stress control
M9 with sucrose; no stress control
-0.2
+0.2
+0.2
N.D.
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.5
+0.5
+0.2
N.D.
+0.0
no stress control
M9 with sucrose; no stress control
-0.1
+0.4
+0.2
N.D.
-0.3
no stress control
M9 with sucrose; no stress control
-0.4
+0.6
+0.2
N.D.
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.0
+0.4
+0.1
N.D.
-0.2
no stress control
M9 with sucrose; no stress control
-0.2
+0.5
+0.2
N.D.
-0.1
no stress control
M9 with sucrose; no stress control
+0.1
+0.4
+0.1
N.D.
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+3.1
+0.4
+0.0
N.D.
+0.2
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