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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3667 and EX28DRAFT_3668 are separated by 10 nucleotides
EX28DRAFT_3668 and EX28DRAFT_3669 are separated by 2 nucleotides
EX28DRAFT_3669 and EX28DRAFT_3670 overlap by 1 nucleotides
EX28DRAFT_3670 and EX28DRAFT_3671 are separated by 43 nucleotides
EX28DRAFT_3667: EX28DRAFT_3667 - 3-isopropylmalate dehydratase, small subunit, at 333,776 to 334,381
_3667
EX28DRAFT_3668: EX28DRAFT_3668 - 3-isopropylmalate dehydratase, large subunit, at 334,392 to 335,792
_3668
EX28DRAFT_3669: EX28DRAFT_3669 - 3-isopropylmalate dehydrogenase, at 335,795 to 336,886
_3669
EX28DRAFT_3670: EX28DRAFT_3670 - 2-isopropylmalate synthase (EC 2.3.3.13), at 336,886 to 338,457
_3670
EX28DRAFT_3671: EX28DRAFT_3671 - RNA, at 338,501 to 338,649
_3671
Group
Condition
EX28DRAFT
_3667
EX28DRAFT
_3668
EX28DRAFT
_3669
EX28DRAFT
_3670
EX28DRAFT
_3671
stress
M9 with sucrose and trichloroethylene 76.3 uM
-6.1
-4.3
-4.7
-3.6
-2.5
stress
MS_media with m-arsenite 1 mM
-5.7
-4.1
-3.7
-3.1
-2.1
no stress control
M9 with sucrose; no stress control
-3.7
-4.6
-3.8
-3.4
-3.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
-4.0
-5.0
-3.7
-3.4
-2.3
stress
MS_media with m-arsenite 1 mM
-3.3
-4.6
-4.8
-3.3
-2.1
stress
MS_media with m-arsenite 1 mM
-3.9
-4.2
-4.4
-3.8
-1.4
no stress control
M9 with sucrose; no stress control
-4.7
-4.0
-3.5
-3.1
-2.2
no stress control
M9 with sucrose; no stress control
-2.8
-4.6
-4.1
-3.2
-2.6
stress
M9 with sucrose and trichloroethylene 76.3 uM
-4.4
-4.1
-3.5
-2.7
-2.5
stress
MS_media with m-arsenite 1 mM
-4.8
-3.5
-3.8
-2.9
-2.1
no stress control
M9 with sucrose; no stress control
-4.9
-3.9
-2.6
-2.7
-2.9
no stress control
M9 with sucrose; no stress control
-2.8
-4.0
-4.4
-3.2
-2.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-3.4
-3.5
-3.6
-2.9
-2.6
no stress control
M9 with sucrose; no stress control
-3.3
-4.1
-3.2
-2.7
-2.7
no stress control
MS_media no stress control
-6.0
-3.7
-2.9
-1.9
-1.4
stress
MS_media with m-arsenite 1 mM
-2.1
-4.3
-3.2
-3.2
-3.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
-2.6
-3.7
-4.3
-2.8
-2.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-2.7
-3.6
-3.9
-2.9
-2.5
no stress control
M9 with sucrose; no stress control
-3.6
-3.4
-3.2
-3.0
-2.3
stress
MS_media with m-arsenite 1 mM
-3.4
-3.5
-3.1
-2.8
-2.1
no stress control
M9 with sucrose; no stress control
-2.2
-3.7
-3.4
-2.8
-1.9
no stress control
MS_media no stress control
-2.4
-3.5
-3.6
-2.2
-2.1
no stress control
MS_media no stress control
-2.7
-2.9
-3.0
-2.4
-1.9
no stress control
MS_media no stress control
-2.2
-2.7
-3.4
-2.1
-1.5
no stress control
MS_media no stress control
-2.2
-2.7
-3.0
-2.2
-1.6
no stress control
MS_media no stress control
-2.3
-2.9
-2.4
-2.2
-1.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.2
-2.0
-2.3
-2.0
-1.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.4
-2.1
-2.0
-1.8
-1.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.4
-1.2
-1.1
-1.2
-0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.5
-0.9
-1.4
-1.3
-0.8
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