Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_3543 and EX28DRAFT_3544 are separated by 65 nucleotidesEX28DRAFT_3544 and EX28DRAFT_3545 are separated by 9 nucleotidesEX28DRAFT_3545 and EX28DRAFT_3546 are separated by 2 nucleotidesEX28DRAFT_3546 and EX28DRAFT_3547 overlap by 4 nucleotides EX28DRAFT_3543: EX28DRAFT_3543 - 2-oxo-hepta-3-ene-1,7-dioic acid hydratase, at 207,419 to 208,222 _3543 EX28DRAFT_3544: EX28DRAFT_3544 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 208,288 to 208,668 _3544 EX28DRAFT_3545: EX28DRAFT_3545 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase, at 208,678 to 209,529 _3545 EX28DRAFT_3546: EX28DRAFT_3546 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, at 209,532 to 210,998 _3546 EX28DRAFT_3547: EX28DRAFT_3547 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit/4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit, at 210,995 to 212,272 _3547
Group Condition EX28DRAFT_3543 EX28DRAFT_3544 EX28DRAFT_3545 EX28DRAFT_3546 EX28DRAFT_3547
stress M9 with casaminos and trichloroethylene 76.3 uM -0.1 -0.6 -0.2 -0.2 -0.4
no stress control M9 with sucrose; no stress control -0.2 -0.7 -0.4 +0.1 -0.1
no stress control M9 with sucrose; no stress control -0.6 -0.4 -0.3 +0.2 -0.2
no stress control M9 with sucrose; no stress control -0.0 -0.9 -0.2 +0.1 -0.2
no stress control M9 with sucrose; no stress control -0.3 -0.5 -0.2 +0.1 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 -0.4 -0.3 +0.1 -0.1
no stress control MS_media no stress control -0.7 -0.0 -0.1 -0.2 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM +0.2 -0.7 -0.4 -0.1 -0.0
no stress control M9 with sucrose; no stress control -0.1 -0.3 -0.3 +0.1 -0.3
stress M9 with sucrose and trichloroethylene 76.3 uM -0.7 +0.2 -0.1 -0.1 -0.1
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 -0.6 -0.2 -0.1 -0.2
stress M9 with casaminos and trichloroethylene 76.3 uM +0.2 -0.6 -0.2 -0.1 -0.2
no stress control M9 with sucrose; no stress control -0.3 -0.7 -0.2 +0.3 -0.0
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 -0.2 -0.2 -0.3 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.5 -0.2 -0.0 +0.1
no stress control M9 with sucrose; no stress control -0.5 -0.2 -0.3 +0.3 -0.0
stress M9 with sucrose and trichloroethylene 76.3 uM -0.2 -0.2 -0.3 +0.2 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.2 -0.1 -0.4 +0.2 +0.0
no stress control MS_media no stress control -0.5 +0.4 -0.2 -0.2 +0.0
no stress control MS_media no stress control -0.3 +0.2 -0.1 -0.4 +0.2
stress M9 with sucrose and trichloroethylene 76.3 uM +0.2 -0.5 -0.0 +0.3 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.3 -0.7 +0.1 +0.6 +0.3
stress MS_media with arsenate 5 mM -0.6 +0.5 +0.0 +0.1 +0.1
stress MS_media with arsenate 5 mM -0.2 +0.2 -0.1 +0.3 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.5 -0.5 +0.2 +0.4 -0.2
stress MS_media with arsenate 5 mM +0.2 +0.5 -0.3 +0.0 +0.0
stress MS_media with arsenate 5 mM -0.1 +0.6 -0.1 +0.2 +0.1
stress MS_media with arsenate 5 mM -0.3 +0.7 +0.1 +0.0 +0.2
stress MS_media with m-arsenite 1 mM +0.4 +0.3 -0.1 +0.1 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.4 -0.2 +0.4 +0.4 +0.1
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