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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3417 and EX28DRAFT_3418 overlap by 29 nucleotides
EX28DRAFT_3418 and EX28DRAFT_3419 are separated by 150 nucleotides
EX28DRAFT_3419 and EX28DRAFT_3420 are separated by 197 nucleotides
EX28DRAFT_3420 and EX28DRAFT_3421 are separated by 95 nucleotides
EX28DRAFT_3417: EX28DRAFT_3417 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 88,304 to 89,875
_3417
EX28DRAFT_3418: EX28DRAFT_3418 - Bacterial regulatory helix-turn-helix protein, lysR family, at 89,847 to 90,203
_3418
EX28DRAFT_3419: EX28DRAFT_3419 - Fructose-1,6-bisphosphatase, at 90,354 to 91,352
_3419
EX28DRAFT_3420: EX28DRAFT_3420 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, at 91,550 to 92,929
_3420
EX28DRAFT_3421: EX28DRAFT_3421 - Uncharacterized protein conserved in bacteria, at 93,025 to 93,576
_3421
Group
Condition
EX28DRAFT
_3417
EX28DRAFT
_3418
EX28DRAFT
_3419
EX28DRAFT
_3420
EX28DRAFT
_3421
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.9
-4.0
+0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
-0.7
-3.6
+0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.2
-3.6
-0.0
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
-0.4
-3.4
-0.0
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.6
-3.2
+0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-2.8
-0.8
-0.3
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
-0.4
-3.3
-0.0
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.4
-3.1
+0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.0
-1.8
-1.5
-0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.5
-3.8
-0.1
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
-2.4
-0.2
-0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
-2.0
-0.9
-0.3
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
-2.3
-0.6
+0.1
N.D.
no stress control
M9 with sucrose; no stress control
-0.1
-1.5
-0.1
-0.6
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.5
-1.3
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.9
-0.9
+0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-1.1
-0.8
+0.2
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.0
-1.0
-0.1
-0.3
N.D.
no stress control
M9 with sucrose; no stress control
-0.0
-1.6
-0.1
+0.4
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.8
-0.6
+0.4
N.D.
no stress control
M9 with sucrose; no stress control
-0.1
-0.8
-0.3
+0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.4
+0.5
-0.5
-0.2
N.D.
stress
MS_media with m-arsenite 1 mM
-0.0
-1.0
+0.9
-0.5
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.4
-0.9
+0.5
N.D.
stress
MS_media with arsenate 5 mM
+0.1
-0.7
+1.0
-0.5
N.D.
stress
MS_media with m-arsenite 1 mM
+0.2
-0.4
+1.0
-0.1
N.D.
stress
MS_media with m-arsenite 1 mM
-0.2
+0.4
+1.0
-0.2
N.D.
stress
MS_media with m-arsenite 1 mM
+0.1
+0.7
+0.7
-0.3
N.D.
stress
MS_media with arsenate 5 mM
-0.0
-0.4
+1.2
+0.5
N.D.
stress
MS_media with m-arsenite 1 mM
+0.3
+1.0
+0.8
+0.1
N.D.
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