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Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3368 and EX28DRAFT_3369 are separated by 85 nucleotides
EX28DRAFT_3369 and EX28DRAFT_3370 are separated by 74 nucleotides
EX28DRAFT_3370 and EX28DRAFT_3371 are separated by 56 nucleotides
EX28DRAFT_3371 and EX28DRAFT_3372 are separated by 2 nucleotides
EX28DRAFT_3368: EX28DRAFT_3368 - tRNA dimethylallyltransferase, at 36,553 to 37,503
_3368
EX28DRAFT_3369: EX28DRAFT_3369 - RNA chaperone Hfq, at 37,589 to 37,900
_3369
EX28DRAFT_3370: EX28DRAFT_3370 - GTP-binding protein HflX, at 37,975 to 39,255
_3370
EX28DRAFT_3371: EX28DRAFT_3371 - HflK protein, at 39,312 to 40,571
_3371
EX28DRAFT_3372: EX28DRAFT_3372 - HflC protein, at 40,574 to 41,578
_3372
Group
Condition
EX28DRAFT
_3368
EX28DRAFT
_3369
EX28DRAFT
_3370
EX28DRAFT
_3371
EX28DRAFT
_3372
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.2
-2.9
-0.6
-1.2
-1.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.9
-2.3
-0.4
-1.3
-2.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.5
-1.7
-0.5
-0.8
-1.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-3.2
-0.4
-0.2
-0.6
-1.9
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.8
+0.7
-0.7
-0.9
-1.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-3.1
-0.4
-0.5
-0.2
-0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.7
-0.7
-0.3
-0.7
-1.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-3.2
+3.3
-0.6
-1.6
-2.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.4
-0.9
-0.5
-0.5
-1.1
stress
MS_media with arsenate 5 mM
-1.8
-0.8
-0.6
-0.3
-0.8
stress
MS_media with arsenate 5 mM
-1.4
-1.4
-0.5
-0.5
-0.4
stress
MS_media with m-arsenite 1 mM
-3.7
+0.8
-0.2
+0.1
-0.6
stress
MS_media with arsenate 5 mM
-0.9
-0.7
-0.6
-0.3
-1.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.6
-0.4
-1.3
-1.7
stress
MS_media with arsenate 5 mM
-0.5
-1.4
-0.4
+0.0
-0.5
stress
MS_media with m-arsenite 1 mM
-3.7
+1.3
-0.5
+0.2
+0.0
stress
MS_media with m-arsenite 1 mM
-2.2
+0.6
-0.2
+0.0
-0.9
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.7
+0.2
-0.3
-0.4
-1.3
stress
MS_media with arsenate 5 mM
-1.5
+0.5
-0.6
-0.3
-0.4
stress
MS_media with m-arsenite 1 mM
-2.2
+1.0
-0.4
-0.1
-0.3
no stress control
M9 with sucrose; no stress control
-1.1
-0.4
-0.3
-0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-2.8
+2.6
-0.3
-0.5
-0.9
no stress control
M9 with sucrose; no stress control
-1.5
+0.2
-0.1
-0.2
-0.1
stress
MS_media with arsenate 5 mM
-1.8
+1.0
-0.6
-0.2
-0.1
stress
MS_media with m-arsenite 1 mM
-1.9
+1.1
-0.3
+0.2
-0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
+1.0
-0.9
-0.3
-0.4
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.0
+1.9
-0.4
-0.3
-0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
+1.2
-0.3
-0.8
-0.9
stress
MS_media with m-arsenite 1 mM
-1.6
+1.6
-0.2
+0.0
+0.1
no stress control
M9 with sucrose; no stress control
-0.8
+1.5
-0.3
-0.1
+0.1
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