Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_3316 and EX28DRAFT_3317 overlap by 85 nucleotidesEX28DRAFT_3317 and EX28DRAFT_3318 are separated by 387 nucleotidesEX28DRAFT_3318 and EX28DRAFT_3319 are separated by 11 nucleotidesEX28DRAFT_3319 and EX28DRAFT_3320 are separated by 303 nucleotides EX28DRAFT_3316: EX28DRAFT_3316 - diguanylate cyclase (GGDEF) domain, at 615,117 to 617,198 _3316 EX28DRAFT_3317: EX28DRAFT_3317 - transcriptional regulator, TetR family, at 617,114 to 617,833 _3317 EX28DRAFT_3318: EX28DRAFT_3318 - RND family efflux transporter, MFP subunit, at 618,221 to 619,360 _3318 EX28DRAFT_3319: EX28DRAFT_3319 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 619,372 to 622,485 _3319 EX28DRAFT_3320: EX28DRAFT_3320 - hypothetical protein, at 622,789 to 623,010 _3320
Group Condition EX28DRAFT_3316 EX28DRAFT_3317 EX28DRAFT_3318 EX28DRAFT_3319 EX28DRAFT_3320
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.1 +0.0 -0.1 -0.0 -4.1
stress M9 with sucrose and trichloroethylene 76.3 uM +0.2 -0.2 -0.0 +0.0 -3.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.4 -0.2 +0.2 +0.2 -3.7
stress MS_media with m-arsenite 1 mM -0.0 -0.1 -0.1 +0.0 -2.9
stress MS_media with m-arsenite 1 mM -0.2 -0.3 +0.1 -0.1 -1.7
stress M9 with casaminos and trichloroethylene 76.3 uM +0.2 -0.1 -0.0 +0.0 -2.0
stress MS_media with m-arsenite 1 mM +0.0 -0.1 +0.2 +0.0 -1.8
no stress control M9 with sucrose; no stress control +0.1 -0.3 -0.1 -0.0 -1.3
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.6 -0.1 -0.2 -0.4
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.5 -0.1 +0.1 -0.5
no stress control MS_media no stress control -0.2 -0.2 -0.0 -0.0 -0.8
no stress control M9 with sucrose; no stress control +0.1 -0.1 -0.0 +0.0 -0.8
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 -0.5 +0.1 -0.1 -0.5
stress M9 with sucrose and trichloroethylene 76.3 uM +0.2 -0.2 -0.1 -0.0 -0.7
stress MS_media with arsenate 5 mM +0.2 -0.3 +0.0 +0.0 -0.7
stress M9 with sucrose and trichloroethylene 76.3 uM +0.4 -0.1 -0.1 +0.1 -0.5
stress M9 with casaminos and trichloroethylene 76.3 uM +0.0 -0.4 -0.1 -0.0 +0.7
stress M9 with casaminos and trichloroethylene 76.3 uM +0.3 -0.4 -0.1 +0.0 +0.5
no stress control M9 with sucrose; no stress control +0.0 -0.3 +0.1 -0.0 +0.6
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 -0.4 -0.1 -0.0 +0.8
no stress control MS_media no stress control -0.2 -0.1 +0.2 +0.1 +0.5
stress MS_media with m-arsenite 1 mM -0.0 -0.2 +0.1 +0.0 +0.7
no stress control MS_media no stress control -0.1 +0.2 +0.1 +0.0 +0.7
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.4 +0.3 +0.4 +0.1 -0.2
stress M9 with sucrose and trichloroethylene 76.3 uM +0.2 -0.3 +0.1 -0.0 +1.0
no stress control M9 with sucrose; no stress control +0.2 -0.4 +0.1 -0.1 +1.4
stress MS_media with arsenate 5 mM +0.0 -0.2 +0.2 +0.1 +1.2
no stress control M9 with sucrose; no stress control +0.2 +0.0 +0.0 +0.2 +0.9
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.3 +0.3 -0.1 +0.3 +0.8
stress M9 with sucrose and trichloroethylene 76.3 uM +0.2 +0.1 +0.2 +0.0 +1.3
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