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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3207 and EX28DRAFT_3208 are separated by 7 nucleotides
EX28DRAFT_3208 and EX28DRAFT_3209 are separated by 78 nucleotides
EX28DRAFT_3209 and EX28DRAFT_3210 are separated by 62 nucleotides
EX28DRAFT_3210 and EX28DRAFT_3211 are separated by 142 nucleotides
EX28DRAFT_3207: EX28DRAFT_3207 - Collagenase and related proteases, at 505,454 to 506,449
_3207
EX28DRAFT_3208: EX28DRAFT_3208 - Collagenase and related proteases, at 506,457 to 507,335
_3208
EX28DRAFT_3209: EX28DRAFT_3209 - luciferase family oxidoreductase, group 1, at 507,414 to 508,421
_3209
EX28DRAFT_3210: EX28DRAFT_3210 - aromatic amino acid transport protein, at 508,484 to 509,728
_3210
EX28DRAFT_3211: EX28DRAFT_3211 - Superfamily II DNA and RNA helicases, at 509,871 to 511,766
_3211
Group
Condition
EX28DRAFT
_3207
EX28DRAFT
_3208
EX28DRAFT
_3209
EX28DRAFT
_3210
EX28DRAFT
_3211
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.0
-0.6
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.1
-0.1
-0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.1
-0.2
+0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.2
-0.3
-0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
+0.2
-0.5
-0.1
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
+0.1
-0.1
-0.1
N.D.
no stress control
MS_media no stress control
+0.0
+0.1
-0.2
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
+0.3
-0.2
-0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.1
-0.1
-0.1
N.D.
stress
MS_media with m-arsenite 1 mM
+0.2
+0.1
-0.2
+0.0
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
+0.3
+0.1
-0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
+0.3
-0.4
+0.0
N.D.
no stress control
M9 with sucrose; no stress control
+0.2
+0.2
-0.0
-0.1
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
+0.2
-0.1
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.3
+0.3
+0.1
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
+0.2
+0.1
-0.0
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.2
-0.0
+0.1
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.1
-0.0
+0.2
N.D.
no stress control
MS_media no stress control
+0.3
+0.1
+0.0
+0.0
N.D.
no stress control
M9 with sucrose; no stress control
-0.0
+0.1
+0.2
+0.2
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.2
+0.0
+0.2
N.D.
no stress control
M9 with sucrose; no stress control
+0.1
+0.4
+0.0
+0.0
N.D.
no stress control
M9 with sucrose; no stress control
+0.0
+0.3
+0.1
+0.1
N.D.
stress
MS_media with m-arsenite 1 mM
+0.1
+0.3
+0.0
+0.1
N.D.
stress
MS_media with m-arsenite 1 mM
+0.3
+0.1
-0.0
+0.1
N.D.
no stress control
M9 with sucrose; no stress control
-0.1
+0.3
+0.1
+0.2
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
+0.2
-0.1
+0.3
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.1
+0.0
+0.3
N.D.
stress
MS_media with m-arsenite 1 mM
+0.1
+0.5
-0.0
+0.1
N.D.
no stress control
M9 with sucrose; no stress control
+0.0
+0.5
+0.3
-0.1
N.D.
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