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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3135 and EX28DRAFT_3136 are separated by 0 nucleotides
EX28DRAFT_3136 and EX28DRAFT_3137 are separated by 147 nucleotides
EX28DRAFT_3137 and EX28DRAFT_3138 overlap by 4 nucleotides
EX28DRAFT_3138 and EX28DRAFT_3139 are separated by 336 nucleotides
EX28DRAFT_3135: EX28DRAFT_3135 - hypothetical protein, at 434,737 to 435,906
_3135
EX28DRAFT_3136: EX28DRAFT_3136 - Siderophore-interacting protein, at 435,907 to 436,671
_3136
EX28DRAFT_3137: EX28DRAFT_3137 - Predicted transcriptional regulators, at 436,819 to 437,313
_3137
EX28DRAFT_3138: EX28DRAFT_3138 - Methyl-accepting chemotaxis protein, at 437,310 to 438,869
_3138
EX28DRAFT_3139: EX28DRAFT_3139 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor, at 439,206 to 440,726
_3139
Group
Condition
EX28DRAFT
_3135
EX28DRAFT
_3136
EX28DRAFT
_3137
EX28DRAFT
_3138
EX28DRAFT
_3139
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.7
-2.2
-0.3
+0.2
stress
MS_media with arsenate 5 mM
-0.2
+0.0
-1.6
-0.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
-0.3
-1.6
-0.1
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
-0.1
-0.7
+0.1
+0.0
no stress control
M9 with sucrose; no stress control
+0.7
+0.0
-1.6
-0.2
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
-0.1
-1.3
+0.2
-0.2
no stress control
M9 with sucrose; no stress control
+0.4
+0.1
-1.3
-0.2
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
-0.1
-0.8
-0.2
+0.0
stress
MS_media with m-arsenite 1 mM
-0.1
-0.1
-0.6
-0.0
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
-0.2
-0.5
-0.2
-0.1
no stress control
M9 with sucrose; no stress control
+0.5
-0.3
-0.7
+0.0
-0.3
no stress control
M9 with sucrose; no stress control
+0.2
+0.0
-0.6
-0.1
-0.2
stress
MS_media with arsenate 5 mM
-0.2
-0.0
-0.3
-0.3
+0.1
stress
MS_media with arsenate 5 mM
-0.0
+0.3
-0.8
-0.2
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.3
-0.3
-0.2
-0.3
stress
MS_media with arsenate 5 mM
-0.6
+0.1
+0.1
-0.3
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.4
-0.1
-0.6
-0.1
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.6
+0.3
-1.2
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
-0.1
-0.4
-0.1
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.4
-0.0
-0.4
-0.1
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.6
-0.0
-0.7
-0.0
-0.1
no stress control
M9 with sucrose; no stress control
+0.4
+0.1
-0.2
-0.2
-0.0
no stress control
M9 with sucrose; no stress control
+0.3
-0.0
+0.3
-0.2
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
-0.2
-0.4
+0.1
+0.2
stress
MS_media with arsenate 5 mM
+0.2
-0.2
+0.5
-0.2
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
+0.1
+0.2
-0.1
-0.1
stress
MS_media with m-arsenite 1 mM
+0.2
+0.3
-0.2
+0.1
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.3
+0.1
+0.5
-0.2
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
+0.4
+0.6
-0.0
-0.0
stress
MS_media with m-arsenite 1 mM
+0.4
+0.2
+0.3
+0.0
+0.0
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