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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_3081 and EX28DRAFT_3082 are separated by 21 nucleotides
EX28DRAFT_3082 and EX28DRAFT_3083 are separated by 226 nucleotides
EX28DRAFT_3083 and EX28DRAFT_3084 are separated by 60 nucleotides
EX28DRAFT_3084 and EX28DRAFT_3085 are separated by 10 nucleotides
EX28DRAFT_3081: EX28DRAFT_3081 - Glutamine synthetase adenylyltransferase, at 391,326 to 394,181
_3081
EX28DRAFT_3082: EX28DRAFT_3082 - Uncharacterized conserved protein, at 394,203 to 395,504
_3082
EX28DRAFT_3083: EX28DRAFT_3083 - SH3 domain protein, at 395,731 to 396,354
_3083
EX28DRAFT_3084: EX28DRAFT_3084 - tRNA nucleotidyltransferase/poly(A) polymerase, at 396,415 to 397,656
_3084
EX28DRAFT_3085: EX28DRAFT_3085 - undecaprenyl-diphosphatase UppP, at 397,667 to 398,488
_3085
Group
Condition
EX28DRAFT
_3081
EX28DRAFT
_3082
EX28DRAFT
_3083
EX28DRAFT
_3084
EX28DRAFT
_3085
stress
MS_media with m-arsenite 1 mM
-2.7
-1.6
-0.1
N.D.
-0.2
stress
MS_media with m-arsenite 1 mM
-2.8
-1.5
-0.2
N.D.
-0.1
stress
MS_media with m-arsenite 1 mM
-2.8
-1.5
-0.1
N.D.
-0.1
stress
MS_media with m-arsenite 1 mM
-2.8
-1.0
-0.1
N.D.
-0.4
stress
MS_media with m-arsenite 1 mM
-2.5
-1.4
-0.2
N.D.
+0.0
stress
MS_media with m-arsenite 1 mM
-2.7
-1.0
+0.2
N.D.
+0.0
stress
MS_media with arsenate 5 mM
-1.7
-0.0
-0.2
N.D.
-0.7
stress
MS_media with arsenate 5 mM
-1.9
+0.4
-0.2
N.D.
-0.6
stress
MS_media with arsenate 5 mM
-1.5
+0.2
-0.2
N.D.
-0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.3
-0.7
N.D.
-0.6
no stress control
MS_media no stress control
-0.4
-0.9
-0.1
N.D.
-0.1
no stress control
MS_media no stress control
-0.4
-0.9
-0.1
N.D.
-0.1
no stress control
MS_media no stress control
-0.3
-1.0
-0.1
N.D.
-0.1
no stress control
MS_media no stress control
-0.3
-0.9
-0.1
N.D.
-0.0
no stress control
MS_media no stress control
-0.4
-0.7
-0.2
N.D.
-0.1
stress
MS_media with arsenate 5 mM
-1.6
+0.6
+0.2
N.D.
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.0
-0.9
-0.2
N.D.
-0.2
stress
MS_media with arsenate 5 mM
-1.7
+0.8
+0.3
N.D.
-0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.1
-0.4
N.D.
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.3
-0.5
N.D.
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.0
-0.3
N.D.
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.1
-0.5
N.D.
-0.0
no stress control
MS_media no stress control
-0.3
-0.5
-0.3
N.D.
+0.1
stress
MS_media with arsenate 5 mM
-1.5
+0.8
+0.4
N.D.
-0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.4
-0.5
+0.2
N.D.
-0.2
no stress control
M9 with sucrose; no stress control
-0.4
+0.3
+0.1
N.D.
-0.1
no stress control
M9 with sucrose; no stress control
-0.3
+0.0
+0.4
N.D.
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
+0.1
+0.5
N.D.
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.4
+0.3
+0.3
N.D.
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.7
-0.3
N.D.
+0.1
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