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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2796 and EX28DRAFT_2797 overlap by 8 nucleotides
EX28DRAFT_2797 and EX28DRAFT_2798 overlap by 4 nucleotides
EX28DRAFT_2798 and EX28DRAFT_2799 are separated by 186 nucleotides
EX28DRAFT_2799 and EX28DRAFT_2800 overlap by 4 nucleotides
EX28DRAFT_2796: EX28DRAFT_2796 - transcriptional regulator, DeoR family, at 98,230 to 99,003
_2796
EX28DRAFT_2797: EX28DRAFT_2797 - KpsF/GutQ family protein, at 98,996 to 99,961
_2797
EX28DRAFT_2798: EX28DRAFT_2798 - Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains, at 99,958 to 101,472
_2798
EX28DRAFT_2799: EX28DRAFT_2799 - Uncharacterized flavoproteins, at 101,659 to 103,107
_2799
EX28DRAFT_2800: EX28DRAFT_2800 - Pyridine nucleotide-disulphide oxidoreductase, at 103,104 to 104,237
_2800
Group
Condition
EX28DRAFT
_2796
EX28DRAFT
_2797
EX28DRAFT
_2798
EX28DRAFT
_2799
EX28DRAFT
_2800
stress
MS_media with m-arsenite 1 mM
-1.5
-0.2
-0.0
-0.2
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.4
-0.4
+0.1
+0.1
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.1
-0.3
+0.3
-0.2
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-1.1
+0.1
-0.3
-0.0
+0.1
no stress control
M9 with sucrose; no stress control
-0.7
-0.1
-0.4
-0.0
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.1
-0.2
+0.2
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.2
+0.0
+0.0
-0.0
+0.1
stress
MS_media with m-arsenite 1 mM
-1.1
-0.1
-0.0
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.9
-0.4
+0.1
+0.3
-0.2
no stress control
M9 with sucrose; no stress control
-0.7
+0.1
-0.3
-0.1
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.7
-0.3
-0.2
+0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.7
-0.1
+0.5
+0.2
-0.0
no stress control
M9 with sucrose; no stress control
-0.7
-0.4
+0.0
-0.1
+0.1
stress
MS_media with m-arsenite 1 mM
-1.3
+0.2
+0.2
+0.0
-0.0
no stress control
M9 with sucrose; no stress control
-0.6
-0.6
+0.1
+0.1
+0.2
stress
MS_media with m-arsenite 1 mM
-1.2
+0.1
+0.1
+0.0
+0.2
stress
MS_media with m-arsenite 1 mM
-1.1
-0.1
+0.1
+0.0
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
+0.4
-0.1
-0.4
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.9
-0.2
+0.3
+0.0
+0.1
stress
MS_media with arsenate 5 mM
-0.6
-0.4
+0.1
+0.1
+0.2
stress
MS_media with arsenate 5 mM
-0.2
-0.4
+0.2
-0.3
+0.2
stress
MS_media with arsenate 5 mM
-0.3
-0.4
-0.0
+0.1
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-0.1
-0.2
-0.2
+0.3
no stress control
MS_media no stress control
-0.5
-0.2
+0.1
+0.1
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
+0.0
+0.4
-0.3
-0.0
stress
MS_media with m-arsenite 1 mM
-0.8
+0.1
+0.2
+0.1
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
+0.2
-0.1
-0.1
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
+0.3
-0.5
+0.3
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
-0.4
+0.1
-0.2
+0.0
stress
MS_media with arsenate 5 mM
-0.4
+0.1
+0.3
+0.0
+0.3
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