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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2780 and EX28DRAFT_2781 are separated by 4 nucleotides
EX28DRAFT_2781 and EX28DRAFT_2782 are separated by 342 nucleotides
EX28DRAFT_2782 and EX28DRAFT_2783 are separated by 241 nucleotides
EX28DRAFT_2783 and EX28DRAFT_2784 are separated by 131 nucleotides
EX28DRAFT_2780: EX28DRAFT_2780 - tRNA, at 84,978 to 85,054
_2780
EX28DRAFT_2781: EX28DRAFT_2781 - tRNA, at 85,059 to 85,151
_2781
EX28DRAFT_2782: EX28DRAFT_2782 - carbon storage regulator, CsrA, at 85,494 to 85,679
_2782
EX28DRAFT_2783: EX28DRAFT_2783 - alanyl-tRNA synthetase (EC 6.1.1.7), at 85,921 to 88,548
_2783
EX28DRAFT_2784: EX28DRAFT_2784 - Uncharacterized protein conserved in bacteria, at 88,680 to 89,180
_2784
Group
Condition
EX28DRAFT
_2780
EX28DRAFT
_2781
EX28DRAFT
_2782
EX28DRAFT
_2783
EX28DRAFT
_2784
no stress control
MS_media no stress control
N.D.
N.D.
N.D.
N.D.
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
N.D.
N.D.
N.D.
+0.2
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
N.D.
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
N.D.
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
N.D.
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
MS_media no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
stress
MS_media with m-arsenite 1 mM
N.D.
N.D.
N.D.
N.D.
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
N.D.
+0.2
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
N.D.
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
MS_media with m-arsenite 1 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
N.D.
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
N.D.
+0.3
stress
MS_media with m-arsenite 1 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
MS_media with m-arsenite 1 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
MS_media with m-arsenite 1 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
N.D.
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
N.D.
+0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
N.D.
+0.8
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