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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2628 and EX28DRAFT_2629 are separated by 3 nucleotides
EX28DRAFT_2629 and EX28DRAFT_2630 overlap by 8 nucleotides
EX28DRAFT_2630 and EX28DRAFT_2631 are separated by 14 nucleotides
EX28DRAFT_2631 and EX28DRAFT_2632 overlap by 4 nucleotides
EX28DRAFT_2628: EX28DRAFT_2628 - Aspartate/tyrosine/aromatic aminotransferase, at 2,667,154 to 2,668,305
_2628
EX28DRAFT_2629: EX28DRAFT_2629 - nucleoside diphosphate kinase (EC 2.7.4.6), at 2,668,309 to 2,669,370
_2629
EX28DRAFT_2630: EX28DRAFT_2630 - hypothetical protein, at 2,669,363 to 2,670,073
_2630
EX28DRAFT_2631: EX28DRAFT_2631 - Protein of unknown function (DUF2817), at 2,670,088 to 2,671,146
_2631
EX28DRAFT_2632: EX28DRAFT_2632 - Major Facilitator Superfamily, at 2,671,143 to 2,672,324
_2632
Group
Condition
EX28DRAFT
_2628
EX28DRAFT
_2629
EX28DRAFT
_2630
EX28DRAFT
_2631
EX28DRAFT
_2632
no stress control
MS_media no stress control
-0.1
+0.3
-0.1
+0.0
-3.2
no stress control
MS_media no stress control
-0.1
+0.4
-0.1
+0.1
-3.3
no stress control
MS_media no stress control
-0.0
-0.4
+0.2
-0.0
-2.7
no stress control
MS_media no stress control
-0.0
+0.2
+0.1
+0.2
-3.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-1.1
-0.7
-0.1
-0.6
no stress control
MS_media no stress control
+0.1
+0.3
+0.2
+0.1
-3.0
no stress control
MS_media no stress control
-0.1
+0.2
+0.4
+0.0
-2.8
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-1.2
-0.5
-0.0
-0.3
stress
MS_media with m-arsenite 1 mM
-0.1
+0.1
-0.5
-0.3
-1.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.1
-0.7
-0.2
-0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
-0.5
-0.5
-0.2
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
-1.4
-0.1
-0.1
-0.1
stress
MS_media with m-arsenite 1 mM
-0.1
+0.0
+0.0
-0.0
-1.2
stress
MS_media with m-arsenite 1 mM
-0.0
+0.1
+0.1
-0.2
-1.2
stress
MS_media with m-arsenite 1 mM
-0.1
+0.2
-0.3
+0.1
-1.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.3
-0.4
+0.0
-0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
-0.3
-0.7
+0.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
-0.7
-0.1
+0.1
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
-0.6
-0.2
+0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.2
-0.6
+0.1
-0.0
stress
MS_media with m-arsenite 1 mM
+0.1
+0.1
+0.5
-0.0
-1.0
stress
MS_media with m-arsenite 1 mM
-0.1
+0.5
+0.3
-0.1
-0.9
stress
MS_media with arsenate 5 mM
+0.5
+0.5
-0.5
+0.3
-0.7
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.3
+0.4
-0.0
+0.2
-0.1
stress
MS_media with arsenate 5 mM
+0.5
+0.4
+0.3
+0.3
-0.5
stress
MS_media with arsenate 5 mM
+0.5
+0.4
+0.7
+0.1
-0.6
stress
MS_media with arsenate 5 mM
+0.3
+0.6
+0.5
+0.3
-0.6
stress
MS_media with arsenate 5 mM
+0.3
+0.6
+0.4
+0.3
-0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.5
+0.1
+0.2
+0.2
stress
MS_media with arsenate 5 mM
+0.5
+0.7
+0.3
+0.3
-0.7
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