Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_2627 and EX28DRAFT_2628 overlap by 4 nucleotidesEX28DRAFT_2628 and EX28DRAFT_2629 are separated by 3 nucleotidesEX28DRAFT_2629 and EX28DRAFT_2630 overlap by 8 nucleotidesEX28DRAFT_2630 and EX28DRAFT_2631 are separated by 14 nucleotides EX28DRAFT_2627: EX28DRAFT_2627 - Phosphoglycerate dehydrogenase and related dehydrogenases, at 2,666,186 to 2,667,157 _2627 EX28DRAFT_2628: EX28DRAFT_2628 - Aspartate/tyrosine/aromatic aminotransferase, at 2,667,154 to 2,668,305 _2628 EX28DRAFT_2629: EX28DRAFT_2629 - nucleoside diphosphate kinase (EC 2.7.4.6), at 2,668,309 to 2,669,370 _2629 EX28DRAFT_2630: EX28DRAFT_2630 - hypothetical protein, at 2,669,363 to 2,670,073 _2630 EX28DRAFT_2631: EX28DRAFT_2631 - Protein of unknown function (DUF2817), at 2,670,088 to 2,671,146 _2631
Group Condition EX28DRAFT_2627 EX28DRAFT_2628 EX28DRAFT_2629 EX28DRAFT_2630 EX28DRAFT_2631
stress MS_media with m-arsenite 1 mM -0.3 -0.1 +0.1 -0.5 -0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.1 +0.1 -1.4 -0.1 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.7 +0.1 -1.1 -0.7 -0.1
stress M9 with casaminos and trichloroethylene 76.3 uM -0.5 -0.0 -0.2 -0.3 +0.0
no stress control M9 with sucrose; no stress control -0.4 +0.1 -0.2 -0.4 +0.0
stress M9 with sucrose and trichloroethylene 76.3 uM -0.0 -0.1 -0.6 -0.2 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.4 +0.3 -0.5 -0.5 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +1.6 -0.1 -1.2 -0.5 -0.0
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.3 +0.3 -0.7 -0.1 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.6 +0.2 -0.1 -0.7 -0.2
stress M9 with casaminos and trichloroethylene 76.3 uM -0.3 +0.1 +0.3 -0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.5 +0.2 -0.3 -0.4 +0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.9 +0.1 -0.3 -0.7 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.6 +0.2 -0.2 -0.6 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +1.0 +0.0 -0.3 -0.4 -0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +1.0 -0.0 -0.1 -0.4 -0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.4 +0.2 +0.2 -0.3 +0.1
stress MS_media with m-arsenite 1 mM -0.1 -0.1 +0.5 +0.3 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM +0.4 +0.1 +0.2 -0.1 +0.1
stress MS_media with m-arsenite 1 mM +0.2 +0.1 +0.1 +0.5 -0.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.9 +0.2 -0.2 -0.3 +0.1
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 +0.1 -0.0 +0.4 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.9 +0.1 +0.3 -0.3 -0.0
stress MS_media with arsenate 5 mM +0.2 +0.5 +0.5 -0.5 +0.3
stress MS_media with arsenate 5 mM -0.1 +0.5 +0.4 +0.3 +0.3
stress M9 with sucrose and trichloroethylene 76.3 uM +0.6 +0.3 +0.4 -0.0 +0.2
stress MS_media with arsenate 5 mM -0.2 +0.3 +0.6 +0.4 +0.3
stress MS_media with arsenate 5 mM -0.2 +0.3 +0.6 +0.5 +0.3
stress MS_media with arsenate 5 mM +0.0 +0.5 +0.4 +0.7 +0.1
stress MS_media with arsenate 5 mM +0.4 +0.5 +0.7 +0.3 +0.3
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