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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2568 and EX28DRAFT_2569 are separated by 43 nucleotides
EX28DRAFT_2569 and EX28DRAFT_2570 overlap by 4 nucleotides
EX28DRAFT_2570 and EX28DRAFT_2571 are separated by 88 nucleotides
EX28DRAFT_2571 and EX28DRAFT_2572 are separated by 139 nucleotides
EX28DRAFT_2568: EX28DRAFT_2568 - Peroxiredoxin, at 2,598,914 to 2,599,516
_2568
EX28DRAFT_2569: EX28DRAFT_2569 - Protein of unknown function (DUF3999), at 2,599,560 to 2,600,945
_2569
EX28DRAFT_2570: EX28DRAFT_2570 - Predicted membrane protein, at 2,600,942 to 2,603,557
_2570
EX28DRAFT_2571: EX28DRAFT_2571 - Glycosidases, at 2,603,646 to 2,605,472
_2571
EX28DRAFT_2572: EX28DRAFT_2572 - Gamma-aminobutyrate permease and related permeases, at 2,605,612 to 2,606,985
_2572
Group
Condition
EX28DRAFT
_2568
EX28DRAFT
_2569
EX28DRAFT
_2570
EX28DRAFT
_2571
EX28DRAFT
_2572
stress
MS_media with m-arsenite 1 mM
-0.8
-0.2
+0.0
+0.0
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.6
+0.2
-0.0
-0.2
+0.0
stress
MS_media with m-arsenite 1 mM
-0.4
-0.0
+0.1
+0.0
+0.0
stress
MS_media with m-arsenite 1 mM
-0.4
-0.1
+0.2
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.0
-0.1
+0.2
+0.1
no stress control
M9 with sucrose; no stress control
-0.4
+0.1
-0.1
+0.1
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.0
+0.1
-0.2
+0.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.2
-0.3
+0.2
-0.2
stress
MS_media with arsenate 5 mM
-0.3
+0.1
-0.0
+0.1
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
+0.0
-0.2
-0.0
-0.2
no stress control
MS_media no stress control
+0.1
-0.1
+0.2
-0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.1
+0.1
+0.3
-0.1
stress
MS_media with arsenate 5 mM
+0.0
+0.1
+0.1
-0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.0
+0.1
+0.3
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.2
-0.1
+0.0
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.6
+0.1
-0.3
+0.1
-0.1
stress
MS_media with arsenate 5 mM
+0.2
+0.1
+0.1
+0.1
-0.0
stress
MS_media with m-arsenite 1 mM
-0.1
+0.2
+0.1
+0.1
+0.1
no stress control
MS_media no stress control
+0.3
+0.1
+0.1
+0.0
-0.0
stress
MS_media with arsenate 5 mM
+0.3
-0.0
+0.2
+0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
+0.1
+0.0
+0.3
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.1
+0.0
+0.3
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.2
-0.0
+0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.5
+0.1
+0.1
+0.0
-0.1
no stress control
MS_media no stress control
+0.5
+0.1
+0.1
-0.1
+0.2
no stress control
M9 with sucrose; no stress control
+0.5
+0.1
-0.2
+0.3
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
+0.2
-0.2
+0.3
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
+0.1
+0.2
+0.5
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.0
+0.2
+0.2
+0.9
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.7
+0.5
+0.0
+0.2
-0.3
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