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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2529 and EX28DRAFT_2530 are separated by 212 nucleotides
EX28DRAFT_2530 and EX28DRAFT_2531 are separated by 210 nucleotides
EX28DRAFT_2531 and EX28DRAFT_2532 are separated by 69 nucleotides
EX28DRAFT_2532 and EX28DRAFT_2533 are separated by 19 nucleotides
EX28DRAFT_2529: EX28DRAFT_2529 - Parvulin-like peptidyl-prolyl isomerase, at 2,559,413 to 2,561,284
_2529
EX28DRAFT_2530: EX28DRAFT_2530 - Bacterial nucleoid DNA-binding protein, at 2,561,497 to 2,561,769
_2530
EX28DRAFT_2531: EX28DRAFT_2531 - endopeptidase La, at 2,561,980 to 2,564,334
_2531
EX28DRAFT_2532: EX28DRAFT_2532 - RNA, at 2,564,404 to 2,564,497
_2532
EX28DRAFT_2533: EX28DRAFT_2533 - endopeptidase Clp ATP-binding regulatory subunit (clpX), at 2,564,517 to 2,565,791
_2533
Group
Condition
EX28DRAFT
_2529
EX28DRAFT
_2530
EX28DRAFT
_2531
EX28DRAFT
_2532
EX28DRAFT
_2533
stress
MS_media with m-arsenite 1 mM
-0.3
-2.2
-4.1
-0.3
N.D.
stress
MS_media with m-arsenite 1 mM
-0.2
-2.1
-3.7
-0.8
N.D.
stress
MS_media with arsenate 5 mM
-0.2
-0.8
-4.6
-1.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.6
-4.5
-1.1
N.D.
stress
MS_media with m-arsenite 1 mM
-0.3
-1.5
-3.8
-0.8
N.D.
stress
MS_media with arsenate 5 mM
-0.3
-0.5
-4.3
-1.3
N.D.
stress
MS_media with arsenate 5 mM
-0.5
-0.5
-4.6
-0.7
N.D.
stress
MS_media with arsenate 5 mM
-0.3
-0.2
-4.5
-1.1
N.D.
stress
MS_media with m-arsenite 1 mM
-0.3
-1.4
-3.5
-0.7
N.D.
stress
MS_media with m-arsenite 1 mM
-0.3
-0.9
-4.1
-0.5
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.7
-0.1
-3.3
-1.5
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-1.3
-2.6
-1.2
N.D.
stress
MS_media with arsenate 5 mM
-0.3
-0.2
-4.6
-0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.6
-0.7
-2.9
-1.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.5
-3.3
-0.9
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
-0.5
-3.0
-1.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-0.9
-2.9
-0.7
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-1.0
-2.5
-1.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.0
+0.1
-2.2
-1.5
N.D.
no stress control
M9 with sucrose; no stress control
-0.1
+0.4
-3.6
-1.3
N.D.
stress
MS_media with arsenate 5 mM
-0.1
-0.1
-3.4
-1.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.9
-2.2
-1.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-1.4
-1.9
-0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
-0.2
-2.4
-0.8
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
-0.5
-2.4
-0.9
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
-0.3
-2.9
-0.8
N.D.
no stress control
M9 with sucrose; no stress control
-0.3
+0.2
-2.4
-1.3
N.D.
no stress control
M9 with sucrose; no stress control
+0.0
+0.3
-2.6
-1.2
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.3
-2.9
-0.8
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
+0.7
-2.8
-0.9
N.D.
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