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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2472 and EX28DRAFT_2473 overlap by 4 nucleotides
EX28DRAFT_2473 and EX28DRAFT_2474 are separated by 108 nucleotides
EX28DRAFT_2474 and EX28DRAFT_2475 are separated by 50 nucleotides
EX28DRAFT_2475 and EX28DRAFT_2476 overlap by 2 nucleotides
EX28DRAFT_2472: EX28DRAFT_2472 - Membrane protein implicated in regulation of membrane protease activity, at 2,501,160 to 2,501,612
_2472
EX28DRAFT_2473: EX28DRAFT_2473 - Cu(I)-responsive transcriptional regulator, at 2,501,609 to 2,502,019
_2473
EX28DRAFT_2474: EX28DRAFT_2474 - copper-(or silver)-translocating P-type ATPase, at 2,502,128 to 2,504,626
_2474
EX28DRAFT_2475: EX28DRAFT_2475 - Uncharacterized protein conserved in bacteria, at 2,504,677 to 2,505,471
_2475
EX28DRAFT_2476: EX28DRAFT_2476 - RNA, at 2,505,470 to 2,505,548
_2476
Group
Condition
EX28DRAFT
_2472
EX28DRAFT
_2473
EX28DRAFT
_2474
EX28DRAFT
_2475
EX28DRAFT
_2476
stress
MS_media with m-arsenite 1 mM
-0.3
-0.3
-3.4
-0.3
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-3.6
-0.2
-1.1
+0.3
+0.6
stress
MS_media with m-arsenite 1 mM
-0.0
-0.5
-2.9
-0.1
+0.0
stress
MS_media with m-arsenite 1 mM
-0.1
-0.1
-3.0
-0.3
+0.1
stress
MS_media with m-arsenite 1 mM
-0.2
+0.1
-2.8
-0.2
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-3.3
-0.6
+0.2
-0.1
+0.8
stress
MS_media with m-arsenite 1 mM
-0.1
-0.1
-2.5
-0.1
-0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
-1.4
-0.1
-0.7
-0.1
-0.1
no stress control
M9 with sucrose; no stress control
-1.4
-0.5
-0.6
-0.1
+0.3
stress
MS_media with m-arsenite 1 mM
+0.3
-0.4
-2.8
+0.1
+0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-1.5
-0.1
-0.3
-0.1
+0.1
no stress control
M9 with sucrose; no stress control
-0.8
-0.6
-0.6
-0.1
+0.1
stress
MS_media with arsenate 5 mM
-0.9
-0.2
-0.9
-0.4
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-1.4
-0.2
-0.8
+0.2
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-1.0
-0.3
+0.1
-0.1
-0.4
stress
MS_media with arsenate 5 mM
-1.6
+0.7
-1.0
-0.1
+0.4
no stress control
M9 with sucrose; no stress control
-0.4
-0.1
-0.4
-0.7
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.6
-0.4
-0.4
-0.0
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.4
-0.3
-0.3
+0.4
no stress control
M9 with sucrose; no stress control
-0.7
-0.4
-0.2
+0.2
+0.5
stress
MS_media with arsenate 5 mM
+0.6
-0.2
-0.8
-0.2
+0.0
stress
MS_media with arsenate 5 mM
-0.4
+0.5
-0.7
-0.2
+0.8
no stress control
MS_media no stress control
-0.9
+0.7
-0.0
+0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.9
-0.1
+0.1
+0.3
-0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.2
-0.2
-0.2
-0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.1
+0.3
-0.0
-0.5
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.4
-0.3
-0.0
-0.0
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+1.4
-0.2
-0.2
-0.1
no stress control
MS_media no stress control
+1.0
+0.1
-0.2
-0.1
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+2.5
+0.0
+0.2
-0.7
+0.2
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