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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2456 and EX28DRAFT_2457 are separated by 137 nucleotides
EX28DRAFT_2457 and EX28DRAFT_2458 are separated by 68 nucleotides
EX28DRAFT_2458 and EX28DRAFT_2459 are separated by 161 nucleotides
EX28DRAFT_2459 and EX28DRAFT_2460 overlap by 4 nucleotides
EX28DRAFT_2456: EX28DRAFT_2456 - UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54), at 2,486,639 to 2,487,361
_2456
EX28DRAFT_2457: EX28DRAFT_2457 - Protein of unknown function (DUF1471), at 2,487,499 to 2,487,708
_2457
EX28DRAFT_2458: EX28DRAFT_2458 - hypothetical protein, at 2,487,777 to 2,487,962
_2458
EX28DRAFT_2459: EX28DRAFT_2459 - phosphoribosylaminoimidazole carboxylase, PurE protein, at 2,488,124 to 2,488,633
_2459
EX28DRAFT_2460: EX28DRAFT_2460 - phosphoribosylaminoimidazole carboxylase, PurK protein, at 2,488,630 to 2,489,697
_2460
Group
Condition
EX28DRAFT
_2456
EX28DRAFT
_2457
EX28DRAFT
_2458
EX28DRAFT
_2459
EX28DRAFT
_2460
no stress control
M9 with sucrose; no stress control
N.D.
-0.3
-0.2
N.D.
N.D.
stress
MS_media with arsenate 5 mM
N.D.
-0.5
+0.0
N.D.
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
+0.2
-0.6
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.5
-0.8
N.D.
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.5
+0.3
N.D.
N.D.
no stress control
MS_media no stress control
N.D.
-0.3
+0.3
N.D.
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.4
+0.5
N.D.
N.D.
stress
MS_media with m-arsenite 1 mM
N.D.
-0.2
+0.4
N.D.
N.D.
stress
MS_media with arsenate 5 mM
N.D.
-0.3
+0.5
N.D.
N.D.
no stress control
M9 with sucrose; no stress control
N.D.
-0.1
+0.4
N.D.
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.1
+0.4
N.D.
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.2
+0.6
N.D.
N.D.
no stress control
MS_media no stress control
N.D.
-0.1
+0.5
N.D.
N.D.
stress
MS_media with m-arsenite 1 mM
N.D.
-0.3
+0.7
N.D.
N.D.
stress
MS_media with arsenate 5 mM
N.D.
-0.1
+0.6
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.5
+0.0
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.1
+0.4
N.D.
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
+0.2
+0.4
N.D.
N.D.
no stress control
MS_media no stress control
N.D.
+0.0
+0.5
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.7
-0.2
N.D.
N.D.
no stress control
M9 with sucrose; no stress control
N.D.
+0.0
+0.6
N.D.
N.D.
stress
MS_media with m-arsenite 1 mM
N.D.
+0.2
+0.4
N.D.
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
+0.2
+0.4
N.D.
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
+0.1
+0.5
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
+0.3
+0.4
N.D.
N.D.
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
+0.3
+0.4
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
+0.4
+0.3
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.6
+0.3
N.D.
N.D.
no stress control
M9 with sucrose; no stress control
N.D.
+0.1
+0.9
N.D.
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.7
+0.5
N.D.
N.D.
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