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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2349 and EX28DRAFT_2350 are separated by 128 nucleotides
EX28DRAFT_2350 and EX28DRAFT_2351 are separated by 623 nucleotides
EX28DRAFT_2351 and EX28DRAFT_2352 are separated by 117 nucleotides
EX28DRAFT_2352 and EX28DRAFT_2353 are separated by 0 nucleotides
EX28DRAFT_2349: EX28DRAFT_2349 - alkyl hydroperoxide reductase subunit F, at 2,370,033 to 2,371,598
_2349
EX28DRAFT_2350: EX28DRAFT_2350 - peroxiredoxin, at 2,371,727 to 2,372,290
_2350
EX28DRAFT_2351: EX28DRAFT_2351 - Transcriptional regulator, at 2,372,914 to 2,373,813
_2351
EX28DRAFT_2352: EX28DRAFT_2352 - hypothetical protein, at 2,373,931 to 2,374,083
_2352
EX28DRAFT_2353: EX28DRAFT_2353 - Aspartate/tyrosine/aromatic aminotransferase, at 2,374,084 to 2,375,244
_2353
Group
Condition
EX28DRAFT
_2349
EX28DRAFT
_2350
EX28DRAFT
_2351
EX28DRAFT
_2352
EX28DRAFT
_2353
stress
MS_media with m-arsenite 1 mM
-0.8
-0.0
-0.4
-1.1
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.0
+0.2
-0.7
-0.8
-0.2
stress
MS_media with arsenate 5 mM
-0.1
-0.2
-0.5
-0.4
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.2
-0.7
-0.5
+0.0
stress
MS_media with arsenate 5 mM
+0.0
-0.1
-0.5
-0.4
-0.2
stress
MS_media with m-arsenite 1 mM
-0.2
-0.3
-0.1
-0.6
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.3
-0.6
+0.1
+0.1
no stress control
MS_media no stress control
+0.0
-0.3
-0.5
-0.4
+0.3
stress
MS_media with arsenate 5 mM
+0.0
-0.2
-0.7
-0.0
-0.0
stress
MS_media with m-arsenite 1 mM
-0.4
-0.2
-0.2
-0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.0
-0.4
-0.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
+0.2
-0.9
-0.2
+0.3
stress
MS_media with m-arsenite 1 mM
-0.2
+0.1
-0.4
-0.5
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
+0.1
-0.4
-0.2
+0.1
stress
MS_media with m-arsenite 1 mM
-0.3
-0.1
-0.3
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.1
-0.4
+0.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.2
-0.7
+0.3
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.2
-0.4
-0.2
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
-0.3
+0.4
-0.3
+0.2
no stress control
MS_media no stress control
-0.3
-0.1
-0.2
+0.3
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
+0.3
-0.1
+0.0
+0.1
stress
MS_media with m-arsenite 1 mM
-0.3
-0.3
+0.1
+0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
+0.5
-0.3
+0.1
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.2
-0.7
+1.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.3
-0.3
+0.3
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.1
+0.2
-0.4
+0.0
no stress control
M9 with sucrose; no stress control
-0.3
+0.4
-0.1
+0.2
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
+0.4
-0.0
+0.2
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
+0.3
+0.1
+0.1
-0.2
no stress control
M9 with sucrose; no stress control
+0.0
+0.4
+0.2
+0.7
+0.3
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