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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2312 and EX28DRAFT_2313 are separated by 44 nucleotides
EX28DRAFT_2313 and EX28DRAFT_2314 are separated by 5 nucleotides
EX28DRAFT_2314 and EX28DRAFT_2315 are separated by 400 nucleotides
EX28DRAFT_2315 and EX28DRAFT_2316 overlap by 5 nucleotides
EX28DRAFT_2312: EX28DRAFT_2312 - probable rRNA maturation factor YbeY, at 2,337,689 to 2,338,156
_2312
EX28DRAFT_2313: EX28DRAFT_2313 - Putative Mg2+ and Co2+ transporter CorC, at 2,338,201 to 2,339,124
_2313
EX28DRAFT_2314: EX28DRAFT_2314 - apolipoprotein N-acyltransferase, at 2,339,130 to 2,340,668
_2314
EX28DRAFT_2315: EX28DRAFT_2315 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 2,341,069 to 2,341,974
_2315
EX28DRAFT_2316: EX28DRAFT_2316 - RNA, at 2,341,970 to 2,342,124
_2316
Group
Condition
EX28DRAFT
_2312
EX28DRAFT
_2313
EX28DRAFT
_2314
EX28DRAFT
_2315
EX28DRAFT
_2316
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-2.5
N.D.
-0.1
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-1.2
N.D.
-0.0
-0.8
stress
MS_media with arsenate 5 mM
N.D.
-1.3
N.D.
+0.1
-0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-1.6
N.D.
-0.3
+0.2
stress
MS_media with arsenate 5 mM
N.D.
-1.6
N.D.
+0.4
-0.3
no stress control
M9 with sucrose; no stress control
N.D.
-1.0
N.D.
-0.4
-0.1
stress
MS_media with arsenate 5 mM
N.D.
-1.3
N.D.
+0.3
-0.4
no stress control
M9 with sucrose; no stress control
N.D.
-0.4
N.D.
-0.1
-0.8
stress
MS_media with arsenate 5 mM
N.D.
-1.7
N.D.
+0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.7
N.D.
-0.2
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.2
N.D.
-0.2
-0.6
stress
MS_media with arsenate 5 mM
N.D.
-0.4
N.D.
+0.1
-0.7
no stress control
M9 with sucrose; no stress control
N.D.
-0.5
N.D.
-0.2
-0.3
no stress control
M9 with sucrose; no stress control
N.D.
-0.2
N.D.
-0.4
-0.3
stress
MS_media with arsenate 5 mM
N.D.
-1.7
N.D.
+0.4
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.5
N.D.
-0.3
-0.0
no stress control
M9 with sucrose; no stress control
N.D.
-0.6
N.D.
+0.1
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.3
N.D.
+0.1
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.7
N.D.
+0.5
-0.5
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.3
N.D.
+0.1
-0.5
stress
MS_media with m-arsenite 1 mM
N.D.
-0.1
N.D.
+0.4
-0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-1.1
N.D.
+0.2
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-1.2
N.D.
+0.0
+0.7
stress
MS_media with m-arsenite 1 mM
N.D.
+0.4
N.D.
-0.0
-0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.6
N.D.
-0.0
+0.3
no stress control
M9 with sucrose; no stress control
N.D.
-0.6
N.D.
+0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.9
N.D.
+0.2
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-1.1
N.D.
+0.4
+0.9
stress
MS_media with m-arsenite 1 mM
N.D.
+0.8
N.D.
-0.1
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
+0.1
N.D.
+0.2
+0.8
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