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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2152 and EX28DRAFT_2153 are separated by 86 nucleotides
EX28DRAFT_2153 and EX28DRAFT_2154 are separated by 12 nucleotides
EX28DRAFT_2154 and EX28DRAFT_2155 are separated by 9 nucleotides
EX28DRAFT_2155 and EX28DRAFT_2156 overlap by 4 nucleotides
EX28DRAFT_2152: EX28DRAFT_2152 - Bacterial regulatory proteins, luxR family, at 2,177,434 to 2,178,033
_2152
EX28DRAFT_2153: EX28DRAFT_2153 - PapG chaperone-binding domain, at 2,178,120 to 2,178,902
_2153
EX28DRAFT_2154: EX28DRAFT_2154 - P pilus assembly protein, pilin FimA, at 2,178,915 to 2,179,442
_2154
EX28DRAFT_2155: EX28DRAFT_2155 - P pilus assembly protein, pilin FimA, at 2,179,452 to 2,179,934
_2155
EX28DRAFT_2156: EX28DRAFT_2156 - P pilus assembly protein, pilin FimA, at 2,179,931 to 2,180,422
_2156
Group
Condition
EX28DRAFT
_2152
EX28DRAFT
_2153
EX28DRAFT
_2154
EX28DRAFT
_2155
EX28DRAFT
_2156
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.9
-0.2
-0.1
-0.3
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.6
-0.1
-0.2
-0.3
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.6
-0.0
-0.3
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.2
-0.5
+0.2
-0.1
stress
MS_media with m-arsenite 1 mM
-0.9
-0.1
+0.5
+0.1
+0.0
no stress control
MS_media no stress control
-0.4
-0.2
-0.1
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.4
-0.2
-0.1
+0.1
+0.2
stress
MS_media with m-arsenite 1 mM
-0.5
-0.2
+0.2
+0.1
+0.0
stress
MS_media with m-arsenite 1 mM
-0.7
-0.0
+0.3
+0.3
-0.2
stress
MS_media with arsenate 5 mM
-0.8
+0.3
+0.2
+0.1
-0.2
no stress control
M9 with sucrose; no stress control
+0.3
-0.3
-0.3
-0.0
-0.0
no stress control
MS_media no stress control
-0.5
-0.1
+0.3
+0.2
+0.1
no stress control
M9 with sucrose; no stress control
+0.4
-0.1
-0.2
-0.1
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.1
-0.2
+0.1
+0.2
no stress control
M9 with sucrose; no stress control
+0.5
+0.1
-0.2
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.4
+0.4
-0.0
+0.1
no stress control
M9 with sucrose; no stress control
+0.5
+0.1
-0.2
-0.0
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.5
-0.2
-0.0
-0.0
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
+0.1
-0.2
+0.3
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.9
-0.2
-0.4
+0.1
+0.3
no stress control
M9 with sucrose; no stress control
+0.7
-0.1
-0.1
+0.0
+0.2
stress
MS_media with arsenate 5 mM
+0.3
-0.0
+0.1
+0.2
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.9
+0.0
-0.2
-0.0
+0.1
no stress control
M9 with sucrose; no stress control
+0.8
+0.1
-0.1
+0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.6
-0.2
+0.1
-0.1
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.8
-0.3
-0.1
+0.3
+0.3
no stress control
M9 with sucrose; no stress control
+0.4
+0.3
+0.1
+0.1
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.1
+0.1
-0.1
+0.2
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.9
-0.3
+0.1
+0.3
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.7
+0.1
+0.2
+0.5
+0.1
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