Fitness for 5 genes in Enterobacter asburiae PDN3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 54 experiments or choose conditions or try the comparative fitness browser

500 ntEX28DRAFT_2089 and EX28DRAFT_2090 overlap by 1 nucleotidesEX28DRAFT_2090 and EX28DRAFT_2091 are separated by 173 nucleotidesEX28DRAFT_2091 and EX28DRAFT_2092 are separated by 80 nucleotidesEX28DRAFT_2092 and EX28DRAFT_2093 overlap by 17 nucleotides EX28DRAFT_2089: EX28DRAFT_2089 - amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family, at 2,113,502 to 2,114,218 _2089 EX28DRAFT_2090: EX28DRAFT_2090 - amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family, at 2,114,218 to 2,114,886 _2090 EX28DRAFT_2091: EX28DRAFT_2091 - lysine-arginine-ornithine-binding periplasmic protein, at 2,115,060 to 2,115,791 _2091 EX28DRAFT_2092: EX28DRAFT_2092 - His Kinase A (phospho-acceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 2,115,872 to 2,117,341 _2092 EX28DRAFT_2093: EX28DRAFT_2093 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 2,117,325 to 2,118,032 _2093
Group Condition EX28DRAFT_2089 EX28DRAFT_2090 EX28DRAFT_2091 EX28DRAFT_2092 EX28DRAFT_2093
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.6 +0.0 +0.1 +0.0 -0.4
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.2 -0.1 -0.4 -0.3 -0.2
stress M9 with sucrose and trichloroethylene 76.3 uM -0.3 -0.2 +0.1 -0.1 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 +0.1 +0.3 -0.2 -0.1
stress M9 with casaminos and trichloroethylene 76.3 uM -0.3 -0.3 +0.3 -0.2 +0.2
stress M9 with casaminos and trichloroethylene 76.3 uM -0.4 -0.0 -0.1 +0.1 +0.4
no stress control M9 with sucrose; no stress control -0.2 -0.2 -0.0 +0.2 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.0 +0.4 +0.4 +0.1 -0.8
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 +0.1 +0.4 +0.2 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.2 +0.3 -0.2 +0.0 +0.4
stress MS_media with m-arsenite 1 mM -0.1 +0.4 -0.3 +0.2 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 +0.1 +0.2 +0.3 +0.4
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.6 -0.2 +0.0 +1.3 +0.1
no stress control MS_media no stress control +0.3 +0.3 +0.2 +0.1 -0.2
no stress control MS_media no stress control +0.4 +0.3 -0.1 +0.3 -0.2
stress MS_media with arsenate 5 mM +0.3 +0.5 -0.0 +0.1 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM +0.5 -0.1 +0.3 -0.3 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.2 +0.3 +0.3 +0.2 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.1 +0.3 +0.0 +0.1 +0.4
no stress control MS_media no stress control +0.4 +0.3 +0.2 +0.0 -0.0
stress MS_media with m-arsenite 1 mM -0.1 +0.3 +0.0 +0.3 +0.4
stress MS_media with m-arsenite 1 mM +0.0 +0.4 +0.4 +0.3 -0.2
stress MS_media with arsenate 5 mM +0.4 +0.3 +0.2 +0.1 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 +0.2 +0.2 +0.1 +0.4
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.3 +0.2 +0.1 +0.5 +0.4
no stress control M9 with sucrose; no stress control +0.4 +0.1 +0.1 -0.1 +0.6
stress MS_media with arsenate 5 mM +0.3 +0.2 +0.1 +0.2 +0.3
no stress control MS_media no stress control +0.3 +0.2 +0.2 +0.2 +0.3
stress MS_media with arsenate 5 mM +0.8 +0.3 +0.2 +0.1 -0.3
stress MS_media with m-arsenite 1 mM +0.4 +0.4 -0.0 +0.1 +0.3
remove
EX28DRAFT_2089
plot		 remove
EX28DRAFT_2090
plot		 remove
EX28DRAFT_2091		 remove
EX28DRAFT_2092
plot		 remove
EX28DRAFT_2093
plot