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Protein
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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_2073 and EX28DRAFT_2074 overlap by 8 nucleotides
EX28DRAFT_2074 and EX28DRAFT_2075 overlap by 8 nucleotides
EX28DRAFT_2075 and EX28DRAFT_2076 overlap by 1 nucleotides
EX28DRAFT_2076 and EX28DRAFT_2077 are separated by 2 nucleotides
EX28DRAFT_2073: EX28DRAFT_2073 - type II secretion system protein J, at 2,099,280 to 2,099,960
_2073
EX28DRAFT_2074: EX28DRAFT_2074 - type II secretion system protein I, at 2,099,953 to 2,100,336
_2074
EX28DRAFT_2075: EX28DRAFT_2075 - type II secretion system protein H, at 2,100,329 to 2,100,814
_2075
EX28DRAFT_2076: EX28DRAFT_2076 - type II secretion system protein G, at 2,100,814 to 2,101,263
_2076
EX28DRAFT_2077: EX28DRAFT_2077 - type II secretion system protein F, at 2,101,266 to 2,102,474
_2077
Group
Condition
EX28DRAFT
_2073
EX28DRAFT
_2074
EX28DRAFT
_2075
EX28DRAFT
_2076
EX28DRAFT
_2077
no stress control
M9 with sucrose; no stress control
-0.2
+0.1
-1.7
-0.1
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.5
+0.4
-1.6
-0.1
-0.2
no stress control
M9 with sucrose; no stress control
-0.1
+0.2
-1.3
-0.2
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.4
+0.8
-1.0
-0.2
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
+0.5
-1.3
-0.2
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+0.1
-1.2
+0.1
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
+0.3
-1.3
-0.0
-0.0
no stress control
M9 with sucrose; no stress control
+0.1
+0.2
-1.2
+0.1
-0.0
no stress control
M9 with sucrose; no stress control
+0.0
+0.4
-1.2
+0.0
-0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.4
-1.0
+0.1
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.3
-1.0
+0.1
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.3
+0.4
-1.2
-0.1
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
-0.0
-1.0
+0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.8
-1.6
-0.1
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.5
-0.8
+0.2
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
+0.4
-0.8
+0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.6
-1.0
+0.1
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
+0.3
-0.7
+0.3
-0.3
no stress control
MS_media no stress control
+0.2
-0.9
+0.2
+0.1
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
+0.5
-0.6
+0.1
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
+0.5
-0.9
+0.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.0
+0.0
-1.3
+0.9
+0.2
no stress control
M9 with sucrose; no stress control
+0.1
+0.7
-1.0
+0.2
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.5
-0.8
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.5
-0.7
+0.1
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
+0.2
-0.1
+0.6
-0.0
stress
MS_media with m-arsenite 1 mM
+0.4
-0.7
+0.1
+0.1
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
+0.2
-0.5
+0.5
-0.1
no stress control
M9 with sucrose; no stress control
+0.3
+0.7
-0.3
-0.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.4
+1.0
-0.3
+0.2
-0.3
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