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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1847 and EX28DRAFT_1848 are separated by 109 nucleotides
EX28DRAFT_1848 and EX28DRAFT_1849 are separated by 75 nucleotides
EX28DRAFT_1849 and EX28DRAFT_1850 are separated by 14 nucleotides
EX28DRAFT_1850 and EX28DRAFT_1851 are separated by 75 nucleotides
EX28DRAFT_1847: EX28DRAFT_1847 - Transcriptional regulator, at 1,862,989 to 1,863,927
_1847
EX28DRAFT_1848: EX28DRAFT_1848 - Arabinose efflux permease, at 1,864,037 to 1,865,251
_1848
EX28DRAFT_1849: EX28DRAFT_1849 - flagellar hook-associated protein 3, at 1,865,327 to 1,866,280
_1849
EX28DRAFT_1850: EX28DRAFT_1850 - flagellar hook-associated protein FlgK, at 1,866,295 to 1,867,935
_1850
EX28DRAFT_1851: EX28DRAFT_1851 - flagellar rod assembly protein/muramidase FlgJ, at 1,868,011 to 1,868,964
_1851
Group
Condition
EX28DRAFT
_1847
EX28DRAFT
_1848
EX28DRAFT
_1849
EX28DRAFT
_1850
EX28DRAFT
_1851
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.1
-1.5
-0.9
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.8
-0.3
-1.1
-0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.1
-0.9
-1.0
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.1
-1.2
-0.4
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-0.0
-0.7
-0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.1
-0.3
-0.7
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.4
-0.8
-0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-0.0
-0.6
-0.5
+0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.6
-0.1
-0.2
-0.2
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.5
-0.1
-0.2
-0.3
+0.1
no stress control
M9 with sucrose; no stress control
-0.5
-0.0
+0.0
-0.3
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.1
-0.4
-0.4
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.1
-0.4
-0.6
+0.4
no stress control
M9 with sucrose; no stress control
-0.4
+0.1
-0.3
-0.3
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
+0.1
-0.0
-0.4
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.9
+0.4
+0.0
-0.6
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.4
-0.1
-0.3
-0.1
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
-0.2
+0.1
-0.4
+0.2
no stress control
M9 with sucrose; no stress control
-0.5
+0.2
-0.0
-0.2
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.4
+0.1
+0.2
-0.2
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
+0.0
+0.2
-0.3
+0.1
stress
MS_media with m-arsenite 1 mM
+0.4
-0.1
-0.3
+0.1
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
+0.1
+0.2
-0.2
+0.3
stress
MS_media with m-arsenite 1 mM
+0.1
+0.4
-0.0
-0.0
-0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
+0.2
+0.2
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
-0.5
-0.0
-0.2
+0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.5
-0.2
+0.0
+0.2
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
-0.0
-0.2
+0.0
+0.7
stress
MS_media with arsenate 5 mM
-0.3
+0.0
+0.3
+0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.4
+0.0
-0.1
+0.1
+1.0
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