Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_1847 and EX28DRAFT_1848 are separated by 109 nucleotidesEX28DRAFT_1848 and EX28DRAFT_1849 are separated by 75 nucleotidesEX28DRAFT_1849 and EX28DRAFT_1850 are separated by 14 nucleotidesEX28DRAFT_1850 and EX28DRAFT_1851 are separated by 75 nucleotides EX28DRAFT_1847: EX28DRAFT_1847 - Transcriptional regulator, at 1,862,989 to 1,863,927 _1847 EX28DRAFT_1848: EX28DRAFT_1848 - Arabinose efflux permease, at 1,864,037 to 1,865,251 _1848 EX28DRAFT_1849: EX28DRAFT_1849 - flagellar hook-associated protein 3, at 1,865,327 to 1,866,280 _1849 EX28DRAFT_1850: EX28DRAFT_1850 - flagellar hook-associated protein FlgK, at 1,866,295 to 1,867,935 _1850 EX28DRAFT_1851: EX28DRAFT_1851 - flagellar rod assembly protein/muramidase FlgJ, at 1,868,011 to 1,868,964 _1851
Group Condition EX28DRAFT_1847 EX28DRAFT_1848 EX28DRAFT_1849 EX28DRAFT_1850 EX28DRAFT_1851
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.5 +0.1 -1.5 -0.9 -0.3
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.1 -0.8 -0.3 -1.1 -0.7
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.1 -0.9 -1.0 -0.5
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 -0.1 -1.2 -0.4 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.6 -0.0 -0.7 -0.2 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.2 -0.1 -0.3 -0.7 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.4 -0.8 -0.2 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.6 -0.0 -0.6 -0.5 +0.5
stress M9 with casaminos and trichloroethylene 76.3 uM -0.6 -0.1 -0.2 -0.2 +0.1
stress M9 with sucrose and trichloroethylene 76.3 uM -0.5 -0.1 -0.2 -0.3 +0.1
no stress control M9 with sucrose; no stress control -0.5 -0.0 +0.0 -0.3 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 +0.1 -0.4 -0.4 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 +0.1 -0.4 -0.6 +0.4
no stress control M9 with sucrose; no stress control -0.4 +0.1 -0.3 -0.3 +0.1
stress M9 with casaminos and trichloroethylene 76.3 uM -0.4 +0.1 -0.0 -0.4 +0.0
stress M9 with sucrose and trichloroethylene 76.3 uM -0.9 +0.4 +0.0 -0.6 +0.3
stress M9 with sucrose and trichloroethylene 76.3 uM -0.4 -0.1 -0.3 -0.1 +0.2
stress M9 with casaminos and trichloroethylene 76.3 uM -0.3 -0.2 +0.1 -0.4 +0.2
no stress control M9 with sucrose; no stress control -0.5 +0.2 -0.0 -0.2 +0.0
stress M9 with casaminos and trichloroethylene 76.3 uM -0.4 +0.1 +0.2 -0.2 +0.1
stress M9 with casaminos and trichloroethylene 76.3 uM -0.3 +0.0 +0.2 -0.3 +0.1
stress MS_media with m-arsenite 1 mM +0.4 -0.1 -0.3 +0.1 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM -0.3 +0.1 +0.2 -0.2 +0.3
stress MS_media with m-arsenite 1 mM +0.1 +0.4 -0.0 -0.0 -0.3
stress M9 with casaminos and trichloroethylene 76.3 uM -0.3 +0.2 +0.2 -0.1 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.2 -0.5 -0.0 -0.2 +0.7
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.5 -0.2 +0.0 +0.2 +0.6
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.2 -0.0 -0.2 +0.0 +0.7
stress MS_media with arsenate 5 mM -0.3 +0.0 +0.3 +0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.4 +0.0 -0.1 +0.1 +1.0
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