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Protein
Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1760 and EX28DRAFT_1761 are separated by 75 nucleotides
EX28DRAFT_1761 and EX28DRAFT_1762 overlap by 41 nucleotides
EX28DRAFT_1762 and EX28DRAFT_1763 are separated by 228 nucleotides
EX28DRAFT_1763 and EX28DRAFT_1764 are separated by 71 nucleotides
EX28DRAFT_1760: EX28DRAFT_1760 - Uncharacterized conserved protein, at 1,775,510 to 1,776,079
_1760
EX28DRAFT_1761: EX28DRAFT_1761 - NUDIX domain, at 1,776,155 to 1,776,571
_1761
EX28DRAFT_1762: EX28DRAFT_1762 - Protein of unknown function (DUF1496), at 1,776,531 to 1,776,809
_1762
EX28DRAFT_1763: EX28DRAFT_1763 - Glutamate dehydrogenase/leucine dehydrogenase, at 1,777,038 to 1,778,381
_1763
EX28DRAFT_1764: EX28DRAFT_1764 - DNA topoisomerase III, bacteria and conjugative plasmid, at 1,778,453 to 1,780,360
_1764
Group
Condition
EX28DRAFT
_1760
EX28DRAFT
_1761
EX28DRAFT
_1762
EX28DRAFT
_1763
EX28DRAFT
_1764
stress
MS_media with arsenate 5 mM
-0.4
-0.5
+0.0
-1.4
-0.2
stress
MS_media with arsenate 5 mM
-0.7
-0.3
+0.0
-0.7
-0.3
no stress control
MS_media no stress control
-0.1
-0.1
+0.2
-0.8
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.7
-0.1
+0.1
-0.2
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.7
+0.0
-0.2
+0.3
-0.0
no stress control
M9 with sucrose; no stress control
+0.1
-0.4
+0.2
-0.4
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.5
+0.2
+0.0
-0.2
stress
MS_media with arsenate 5 mM
+0.2
-0.2
+0.2
-0.5
-0.2
stress
MS_media with m-arsenite 1 mM
-0.1
-0.5
+0.5
-0.5
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
-0.5
+0.4
-0.2
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.4
+0.1
+0.2
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.3
-0.2
+0.2
-0.4
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.4
-0.2
+0.4
-0.0
no stress control
M9 with sucrose; no stress control
+0.3
-0.4
+0.1
+0.3
-0.1
no stress control
M9 with sucrose; no stress control
+0.6
-0.3
-0.1
+0.2
-0.2
no stress control
M9 with sucrose; no stress control
+0.6
+0.1
-0.4
+0.1
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
-0.3
+0.0
+0.4
-0.2
no stress control
M9 with sucrose; no stress control
+0.8
-0.7
+0.1
+0.3
-0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.1
-0.1
+0.5
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
-0.3
-0.1
+0.8
-0.1
no stress control
M9 with sucrose; no stress control
+0.5
-0.3
+0.1
+0.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.0
+0.2
+0.8
-0.0
no stress control
M9 with sucrose; no stress control
+0.6
-0.4
+0.1
+0.4
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.5
-0.4
+0.1
+0.5
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.5
-0.3
-0.2
+0.7
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.0
+0.2
+0.8
-0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.5
-0.3
+0.1
+0.7
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.8
-0.3
+0.1
+0.4
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.7
-0.1
+0.0
+0.9
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.2
+0.2
+0.7
+0.2
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