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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1755 and EX28DRAFT_1756 overlap by 28 nucleotides
EX28DRAFT_1756 and EX28DRAFT_1757 overlap by 1 nucleotides
EX28DRAFT_1757 and EX28DRAFT_1758 are separated by 73 nucleotides
EX28DRAFT_1758 and EX28DRAFT_1759 overlap by 4 nucleotides
EX28DRAFT_1755: EX28DRAFT_1755 - ABC-type uncharacterized transport system, periplasmic component, at 1,770,231 to 1,771,400
_1755
EX28DRAFT_1756: EX28DRAFT_1756 - ABC-type uncharacterized transport system, permease component, at 1,771,373 to 1,772,902
_1756
EX28DRAFT_1757: EX28DRAFT_1757 - ABC-type uncharacterized transport system, ATPase component, at 1,772,902 to 1,773,522
_1757
EX28DRAFT_1758: EX28DRAFT_1758 - Rhodanese-related sulfurtransferase, at 1,773,596 to 1,774,903
_1758
EX28DRAFT_1759: EX28DRAFT_1759 - Phosphatidylglycerophosphate synthase, at 1,774,900 to 1,775,517
_1759
Group
Condition
EX28DRAFT
_1755
EX28DRAFT
_1756
EX28DRAFT
_1757
EX28DRAFT
_1758
EX28DRAFT
_1759
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
-0.4
-0.1
-0.3
-0.3
no stress control
M9 with sucrose; no stress control
-0.1
-0.3
-0.4
-0.2
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
-0.1
-0.7
+0.0
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.9
+0.1
-0.0
-0.7
+0.5
no stress control
M9 with sucrose; no stress control
-0.1
-0.4
-0.5
+0.2
-0.1
stress
MS_media with m-arsenite 1 mM
-0.1
+0.2
-0.1
+0.1
-0.6
no stress control
M9 with sucrose; no stress control
+0.3
-0.4
-0.2
+0.1
-0.4
stress
MS_media with m-arsenite 1 mM
-0.1
-0.2
-0.0
+0.3
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.1
-0.6
+0.3
-0.1
no stress control
MS_media no stress control
-0.4
+0.0
+0.1
+0.2
-0.4
stress
MS_media with m-arsenite 1 mM
-0.0
+0.1
+0.2
+0.2
-0.6
stress
MS_media with arsenate 5 mM
-0.2
+0.2
+0.1
+0.2
-0.5
no stress control
MS_media no stress control
+0.3
-0.1
+0.1
-0.0
-0.5
no stress control
M9 with sucrose; no stress control
+0.3
-0.2
-0.3
+0.2
-0.1
no stress control
M9 with sucrose; no stress control
+0.1
-0.4
-0.0
+0.2
+0.2
no stress control
M9 with sucrose; no stress control
+0.4
+0.3
-0.5
+0.1
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.3
-0.0
+0.4
-0.0
-0.6
stress
MS_media with arsenate 5 mM
-0.4
+0.2
+0.5
+0.1
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.9
+0.2
-0.4
-0.3
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.1
+0.5
-0.1
+0.7
stress
MS_media with arsenate 5 mM
-0.2
+0.2
+0.7
+0.2
-0.3
stress
MS_media with m-arsenite 1 mM
+0.0
+0.1
+0.4
+0.4
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.3
+0.5
+0.2
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.0
+0.4
+0.2
+0.4
stress
MS_media with arsenate 5 mM
-0.2
+0.1
+0.9
-0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
+0.1
-0.0
+0.3
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.1
-0.2
+0.8
+0.2
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
-0.0
+0.7
+0.3
+0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.4
+0.3
+0.1
-0.1
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.3
+1.1
+0.3
+1.3
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