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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1737 and EX28DRAFT_1738 are separated by 11 nucleotides
EX28DRAFT_1738 and EX28DRAFT_1739 are separated by 109 nucleotides
EX28DRAFT_1739 and EX28DRAFT_1740 are separated by 29 nucleotides
EX28DRAFT_1740 and EX28DRAFT_1741 are separated by 47 nucleotides
EX28DRAFT_1737: EX28DRAFT_1737 - Uncharacterized protein conserved in bacteria, at 1,752,639 to 1,753,388
_1737
EX28DRAFT_1738: EX28DRAFT_1738 - Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases, at 1,753,400 to 1,754,755
_1738
EX28DRAFT_1739: EX28DRAFT_1739 - Helix-turn-helix domain/Cupin domain, at 1,754,865 to 1,755,683
_1739
EX28DRAFT_1740: EX28DRAFT_1740 - Phosphotransferase system cellobiose-specific component IIA, at 1,755,713 to 1,756,060
_1740
EX28DRAFT_1741: EX28DRAFT_1741 - phosphotransferase system, cellobiose specific, IIC component, at 1,756,108 to 1,757,466
_1741
Group
Condition
EX28DRAFT
_1737
EX28DRAFT
_1738
EX28DRAFT
_1739
EX28DRAFT
_1740
EX28DRAFT
_1741
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.5
+0.1
-0.7
-4.2
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.3
-0.7
-2.9
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.3
-0.4
-3.0
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.0
-0.0
-0.3
-2.0
+0.1
no stress control
M9 with sucrose; no stress control
-0.1
-0.0
-0.4
-1.4
+0.1
no stress control
M9 with sucrose; no stress control
-0.0
+0.1
-0.3
-1.4
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.0
-0.2
-0.8
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
-0.0
-0.1
-1.2
+0.0
no stress control
M9 with sucrose; no stress control
+0.3
+0.0
-0.4
-1.3
-0.0
no stress control
M9 with sucrose; no stress control
+0.2
+0.1
-0.5
-1.3
+0.1
stress
MS_media with m-arsenite 1 mM
-0.2
+0.1
-0.5
-0.8
+0.0
no stress control
MS_media no stress control
-0.0
+0.0
-0.2
-1.1
+0.0
no stress control
M9 with sucrose; no stress control
-0.2
+0.0
-0.5
-0.6
-0.0
stress
MS_media with arsenate 5 mM
+0.2
-0.1
-0.2
-1.0
-0.1
stress
MS_media with m-arsenite 1 mM
-0.3
-0.1
-0.6
-0.2
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.0
-0.4
-0.8
-0.0
no stress control
MS_media no stress control
-0.1
+0.1
-0.2
-0.9
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.8
-0.1
+0.0
-1.9
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
-0.1
-0.4
-0.9
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.4
-0.0
-0.3
-0.9
-0.1
stress
MS_media with arsenate 5 mM
-0.8
-0.0
-0.3
+0.4
+0.0
stress
MS_media with m-arsenite 1 mM
-0.0
+0.3
-0.4
-0.5
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.4
+0.1
-0.8
-0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
+0.0
-0.5
+0.4
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
+0.4
-0.4
+0.4
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
-0.2
-0.3
+0.6
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.1
-0.0
-0.4
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
+0.3
-0.5
+0.1
+0.3
stress
MS_media with m-arsenite 1 mM
+0.0
+0.3
-0.8
+1.4
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.5
-0.3
+1.6
+0.1
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