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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1724 and EX28DRAFT_1725 are separated by 97 nucleotides
EX28DRAFT_1725 and EX28DRAFT_1726 are separated by 3 nucleotides
EX28DRAFT_1726 and EX28DRAFT_1727 are separated by 701 nucleotides
EX28DRAFT_1727 and EX28DRAFT_1728 are separated by 229 nucleotides
EX28DRAFT_1724: EX28DRAFT_1724 - ribosomal protein L35, at 1,739,345 to 1,739,542
_1724
EX28DRAFT_1725: EX28DRAFT_1725 - translation initiation factor IF-3, at 1,739,640 to 1,740,182
_1725
EX28DRAFT_1726: EX28DRAFT_1726 - threonyl-tRNA synthetase (EC 6.1.1.3), at 1,740,186 to 1,742,114
_1726
EX28DRAFT_1727: EX28DRAFT_1727 - Putative salt-induced outer membrane protein, at 1,742,816 to 1,743,640
_1727
EX28DRAFT_1728: EX28DRAFT_1728 - hexose kinase, 1-phosphofructokinase family, at 1,743,870 to 1,744,802
_1728
Group
Condition
EX28DRAFT
_1724
EX28DRAFT
_1725
EX28DRAFT
_1726
EX28DRAFT
_1727
EX28DRAFT
_1728
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.3
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
N.D.
N.D.
-0.4
+0.2
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
-0.2
+0.2
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
-0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.2
+0.3
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
-0.2
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
-0.2
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
-0.2
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.3
+0.4
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
-0.1
+0.3
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
-0.2
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.1
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.2
+0.3
stress
MS_media with m-arsenite 1 mM
N.D.
N.D.
N.D.
-0.1
+0.3
no stress control
M9 with sucrose; no stress control
N.D.
N.D.
N.D.
-0.1
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
-0.2
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.3
+0.6
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
-0.1
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
N.D.
N.D.
-0.1
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.3
+0.7
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
+0.3
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
-0.0
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
N.D.
N.D.
+0.0
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.4
+0.8
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
+0.1
+0.4
stress
MS_media with arsenate 5 mM
N.D.
N.D.
N.D.
+0.1
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
-0.3
+0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
N.D.
N.D.
+0.2
+0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
+0.3
+0.6
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
N.D.
N.D.
+0.4
+0.7
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