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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1674 and EX28DRAFT_1675 are separated by 27 nucleotides
EX28DRAFT_1675 and EX28DRAFT_1676 overlap by 8 nucleotides
EX28DRAFT_1676 and EX28DRAFT_1677 are separated by 400 nucleotides
EX28DRAFT_1677 and EX28DRAFT_1678 are separated by 11 nucleotides
EX28DRAFT_1674: EX28DRAFT_1674 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 1,685,823 to 1,686,635
_1674
EX28DRAFT_1675: EX28DRAFT_1675 - ABC-type metal ion transport system, permease component, at 1,686,663 to 1,687,331
_1675
EX28DRAFT_1676: EX28DRAFT_1676 - ABC-type metal ion transport system, ATPase component, at 1,687,324 to 1,688,346
_1676
EX28DRAFT_1677: EX28DRAFT_1677 - Cysteine synthase, at 1,688,747 to 1,690,117
_1677
EX28DRAFT_1678: EX28DRAFT_1678 - Cystathionine beta-lyases/cystathionine gamma-synthases, at 1,690,129 to 1,691,274
_1678
Group
Condition
EX28DRAFT
_1674
EX28DRAFT
_1675
EX28DRAFT
_1676
EX28DRAFT
_1677
EX28DRAFT
_1678
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.1
-1.0
+0.2
-0.6
stress
MS_media with m-arsenite 1 mM
-0.4
-0.5
-0.1
-0.3
-0.2
stress
MS_media with arsenate 5 mM
-0.3
-0.1
-0.5
-0.1
-0.5
stress
MS_media with m-arsenite 1 mM
-0.3
-0.2
-0.5
-0.3
-0.1
stress
MS_media with m-arsenite 1 mM
-0.5
-0.3
-0.2
-0.1
-0.0
stress
MS_media with m-arsenite 1 mM
-0.5
-0.3
-0.3
+0.1
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
-0.3
-1.1
-0.3
+0.7
no stress control
M9 with sucrose; no stress control
+0.0
-0.1
-0.3
+0.0
-0.5
stress
MS_media with m-arsenite 1 mM
-0.6
-0.2
-0.1
+0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
+0.0
-0.5
+0.0
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.2
-0.1
-0.1
-0.2
stress
MS_media with arsenate 5 mM
-0.3
-0.0
-0.3
+0.3
-0.1
stress
MS_media with m-arsenite 1 mM
-0.5
-0.1
+0.4
-0.0
-0.1
no stress control
MS_media no stress control
-0.2
+0.3
-0.5
+0.1
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.2
+0.4
+0.3
-0.4
stress
MS_media with arsenate 5 mM
+0.0
+0.1
-0.7
+0.2
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.3
-0.2
-0.1
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
+0.2
-0.4
+0.2
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.0
-0.1
-0.1
+0.4
stress
MS_media with arsenate 5 mM
-0.2
+0.0
+0.2
+0.3
-0.2
no stress control
M9 with sucrose; no stress control
+0.3
+0.3
-0.3
-0.1
-0.1
stress
MS_media with arsenate 5 mM
-0.1
-0.0
-0.3
+0.2
+0.4
no stress control
M9 with sucrose; no stress control
+0.2
+0.1
+0.6
-0.2
-0.4
no stress control
M9 with sucrose; no stress control
+0.2
+0.2
+0.4
-0.1
-0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
+0.1
+0.4
-0.2
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.3
-0.2
+0.0
+0.1
no stress control
MS_media no stress control
-0.2
-0.1
+0.2
+0.2
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
+0.3
-0.2
+0.1
+0.4
stress
MS_media with arsenate 5 mM
+0.0
+0.1
+0.4
+0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.0
+0.1
+0.5
+0.2
+0.2
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