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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1648 and EX28DRAFT_1649 are separated by 100 nucleotides
EX28DRAFT_1649 and EX28DRAFT_1650 are separated by 95 nucleotides
EX28DRAFT_1650 and EX28DRAFT_1651 are separated by 44 nucleotides
EX28DRAFT_1651 and EX28DRAFT_1652 are separated by 338 nucleotides
EX28DRAFT_1648: EX28DRAFT_1648 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 1,664,809 to 1,665,906
_1648
EX28DRAFT_1649: EX28DRAFT_1649 - lactoylglutathione lyase, at 1,666,007 to 1,666,414
_1649
EX28DRAFT_1650: EX28DRAFT_1650 - ribonuclease T, at 1,666,510 to 1,667,160
_1650
EX28DRAFT_1651: EX28DRAFT_1651 - monothiol glutaredoxin, Grx4 family, at 1,667,205 to 1,667,552
_1651
EX28DRAFT_1652: EX28DRAFT_1652 - Cell wall-associated hydrolases (invasion-associated proteins), at 1,667,891 to 1,668,664
_1652
Group
Condition
EX28DRAFT
_1648
EX28DRAFT
_1649
EX28DRAFT
_1650
EX28DRAFT
_1651
EX28DRAFT
_1652
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
-0.6
-4.1
-0.8
-0.1
stress
MS_media with arsenate 5 mM
-0.2
-0.8
-3.3
-0.3
-0.5
stress
MS_media with arsenate 5 mM
+0.1
-1.2
-2.4
-0.5
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.0
-2.9
-1.0
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.2
-3.0
-0.8
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+0.1
-2.8
-0.8
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.2
-2.5
-0.5
-0.2
stress
MS_media with arsenate 5 mM
-0.0
-1.5
-1.4
-0.2
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.7
-3.1
-0.4
-0.2
stress
MS_media with arsenate 5 mM
-0.0
-1.2
-1.3
-0.4
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.3
-0.4
-2.0
+0.0
-0.5
stress
MS_media with m-arsenite 1 mM
+0.1
-0.0
-1.9
-1.3
-0.2
stress
MS_media with m-arsenite 1 mM
+0.1
+0.1
-1.7
-1.8
+0.0
stress
MS_media with m-arsenite 1 mM
+0.2
-0.5
-1.5
-1.1
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.3
-1.8
-0.3
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.3
+0.3
-2.1
-0.6
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.3
-0.0
-2.2
+0.0
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.2
-2.1
-0.3
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.5
+0.1
-1.6
-0.5
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-0.1
-1.3
-0.4
+0.1
stress
MS_media with m-arsenite 1 mM
+0.2
+0.1
-1.5
-1.1
-0.0
stress
MS_media with arsenate 5 mM
+0.3
-1.0
-1.3
-0.1
-0.2
no stress control
M9 with sucrose; no stress control
+0.0
+0.1
-1.3
-1.0
-0.2
stress
MS_media with arsenate 5 mM
+0.0
-0.1
-1.4
-0.5
-0.2
no stress control
M9 with sucrose; no stress control
-0.1
+0.1
-1.2
-0.4
-0.5
no stress control
M9 with sucrose; no stress control
-0.1
+0.1
-1.3
-0.4
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+1.2
-1.3
-1.1
-0.5
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
-0.0
-1.4
-0.5
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.3
-0.9
-0.5
-0.3
stress
MS_media with m-arsenite 1 mM
+0.4
-0.2
-0.4
-1.3
+0.1
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