Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_1637 and EX28DRAFT_1638 are separated by 199 nucleotidesEX28DRAFT_1638 and EX28DRAFT_1639 are separated by 35 nucleotidesEX28DRAFT_1639 and EX28DRAFT_1640 are separated by 192 nucleotidesEX28DRAFT_1640 and EX28DRAFT_1641 overlap by 34 nucleotides EX28DRAFT_1637: EX28DRAFT_1637 - Outer membrane lipoprotein, at 1,654,754 to 1,655,221 _1637 EX28DRAFT_1638: EX28DRAFT_1638 - diguanylate cyclase (GGDEF) domain, at 1,655,421 to 1,656,782 _1638 EX28DRAFT_1639: EX28DRAFT_1639 - Transcriptional regulators, at 1,656,818 to 1,657,252 _1639 EX28DRAFT_1640: EX28DRAFT_1640 - Protein of unknown function (DUF1656), at 1,657,445 to 1,657,681 _1640 EX28DRAFT_1641: EX28DRAFT_1641 - RND family efflux transporter, MFP subunit, at 1,657,648 to 1,658,544 _1641
Group Condition EX28DRAFT_1637 EX28DRAFT_1638 EX28DRAFT_1639 EX28DRAFT_1640 EX28DRAFT_1641
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.6 -0.3 N.D. -0.8 -0.4
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.8 -0.3 N.D. -0.2 -0.4
stress MS_media with m-arsenite 1 mM -0.3 +0.0 N.D. -1.6 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.9 -0.2 N.D. -0.1 -0.5
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.6 -0.3 N.D. -0.4 -0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.8 -0.2 N.D. -0.4 -0.0
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.8 -0.3 N.D. +0.2 -0.3
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.4 -0.1 N.D. -0.6 -0.2
stress M9 with sucrose and trichloroethylene 76.3 uM -0.4 -0.1 N.D. -0.5 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.7 -0.3 N.D. +0.6 -0.7
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.1 -0.4 N.D. -0.5 -0.2
no stress control M9 with sucrose; no stress control -0.4 -0.1 N.D. -0.5 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.6 -0.3 N.D. +0.1 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.8 -0.0 N.D. -0.1 -0.0
no stress control M9 with sucrose; no stress control -0.2 -0.1 N.D. -0.6 +0.0
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 -0.2 N.D. -0.3 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.2 +0.1 N.D. -0.5 -0.1
stress M9 with casaminos and trichloroethylene 76.3 uM -0.2 +0.0 N.D. -0.3 -0.2
stress MS_media with m-arsenite 1 mM -0.3 +0.0 N.D. -0.4 +0.1
stress M9 with sucrose and trichloroethylene 76.3 uM -0.0 -0.3 N.D. +0.2 -0.4
stress MS_media with m-arsenite 1 mM -0.7 +0.1 N.D. +0.3 -0.1
stress M9 with sucrose and trichloroethylene 76.3 uM +0.1 -0.1 N.D. -0.5 +0.0
stress MS_media with m-arsenite 1 mM -0.4 -0.1 N.D. +0.2 -0.1
stress M9 with casaminos and trichloroethylene 76.3 uM +0.2 -0.0 N.D. -0.4 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours -0.1 -0.4 N.D. +0.5 -0.2
no stress control M9 with sucrose; no stress control -0.4 -0.0 N.D. +0.3 -0.0
stress MS_media with m-arsenite 1 mM -0.2 +0.0 N.D. +0.4 +0.1
stress MS_media with arsenate 5 mM -0.1 +0.0 N.D. +0.4 +0.2
stress MS_media with m-arsenite 1 mM -0.1 +0.0 N.D. +0.6 +0.1
stress MS_media with arsenate 5 mM -0.0 -0.1 N.D. +0.7 +0.1
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