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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1371 and EX28DRAFT_1372 overlap by 4 nucleotides
EX28DRAFT_1372 and EX28DRAFT_1373 are separated by 1 nucleotides
EX28DRAFT_1373 and EX28DRAFT_1374 overlap by 4 nucleotides
EX28DRAFT_1374 and EX28DRAFT_1375 overlap by 4 nucleotides
EX28DRAFT_1371: EX28DRAFT_1371 - Cyclopropane fatty acid synthase and related methyltransferases, at 1,386,661 to 1,387,881
_1371
EX28DRAFT_1372: EX28DRAFT_1372 - Uncharacterized conserved protein, at 1,387,878 to 1,388,600
_1372
EX28DRAFT_1373: EX28DRAFT_1373 - Predicted NAD/FAD-binding protein, at 1,388,602 to 1,389,861
_1373
EX28DRAFT_1374: EX28DRAFT_1374 - Short-chain dehydrogenases of various substrate specificities, at 1,389,858 to 1,390,577
_1374
EX28DRAFT_1375: EX28DRAFT_1375 - SnoaL-like domain, at 1,390,574 to 1,391,008
_1375
Group
Condition
EX28DRAFT
_1371
EX28DRAFT
_1372
EX28DRAFT
_1373
EX28DRAFT
_1374
EX28DRAFT
_1375
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.4
-0.4
-3.9
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
+0.1
-0.2
-3.7
-0.1
no stress control
MS_media no stress control
-0.1
+0.0
-0.1
-3.3
+0.3
stress
MS_media with m-arsenite 1 mM
-0.0
+0.2
-0.3
-2.0
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.4
-0.3
-1.8
-0.3
stress
MS_media with m-arsenite 1 mM
-0.2
+0.3
-0.1
-2.0
+0.2
stress
MS_media with arsenate 5 mM
-0.1
+0.2
-0.3
-1.8
+0.5
stress
MS_media with m-arsenite 1 mM
-0.2
+0.2
-0.2
-1.0
-0.1
stress
MS_media with arsenate 5 mM
-0.1
-0.1
-0.0
-1.5
+0.5
stress
MS_media with arsenate 5 mM
-0.3
+0.0
+0.0
-1.0
+0.3
stress
MS_media with arsenate 5 mM
-0.0
+0.2
-0.0
-1.1
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+0.2
-0.2
-0.7
+0.2
no stress control
M9 with sucrose; no stress control
+0.2
-0.5
-0.2
+0.8
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-0.3
-0.1
+1.2
-0.1
no stress control
M9 with sucrose; no stress control
+0.0
-0.2
-0.1
+1.2
-0.4
no stress control
M9 with sucrose; no stress control
+0.2
-0.2
-0.3
+0.9
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
-0.5
-0.0
+1.4
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
-0.3
-0.2
+1.1
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.5
-0.2
+1.3
+0.0
no stress control
M9 with sucrose; no stress control
+0.1
-0.3
-0.1
+1.2
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
-0.2
-0.2
+1.6
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.3
-0.1
+1.9
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
+0.4
+0.2
+0.8
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
-0.2
-0.1
+1.7
+0.4
no stress control
M9 with sucrose; no stress control
+0.1
-0.2
-0.2
+2.1
+0.0
no stress control
M9 with sucrose; no stress control
+0.1
-0.2
-0.1
+2.1
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.1
-0.1
+2.1
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
-0.2
-0.0
+2.1
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
-0.1
+0.0
+2.3
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
-0.2
-0.1
+2.3
+0.3
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