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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_1235 and EX28DRAFT_1236 are separated by 114 nucleotides
EX28DRAFT_1236 and EX28DRAFT_1237 overlap by 14 nucleotides
EX28DRAFT_1237 and EX28DRAFT_1238 are separated by 43 nucleotides
EX28DRAFT_1238 and EX28DRAFT_1239 are separated by 236 nucleotides
EX28DRAFT_1235: EX28DRAFT_1235 - Aspartate/tyrosine/aromatic aminotransferase, at 1,253,797 to 1,254,966
_1235
EX28DRAFT_1236: EX28DRAFT_1236 - Transcriptional regulator, at 1,255,081 to 1,255,923
_1236
EX28DRAFT_1237: EX28DRAFT_1237 - Carboxylesterase type B, at 1,255,910 to 1,257,415
_1237
EX28DRAFT_1238: EX28DRAFT_1238 - Uncharacterized protein conserved in bacteria, at 1,257,459 to 1,258,802
_1238
EX28DRAFT_1239: EX28DRAFT_1239 - hypothetical protein, at 1,259,039 to 1,259,227
_1239
Group
Condition
EX28DRAFT
_1235
EX28DRAFT
_1236
EX28DRAFT
_1237
EX28DRAFT
_1238
EX28DRAFT
_1239
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
-0.2
+0.3
+0.0
-2.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
-0.8
-0.1
-0.2
-1.0
no stress control
M9 with sucrose; no stress control
-0.4
-0.6
+0.0
-0.2
-0.6
no stress control
M9 with sucrose; no stress control
-0.3
-0.3
-0.1
-0.4
-0.7
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.0
-0.3
+0.0
-0.2
-1.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
-0.3
+0.0
-0.3
-0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
-0.4
+0.2
-0.1
-0.5
no stress control
M9 with sucrose; no stress control
-0.3
-0.6
+0.1
-0.2
-0.0
no stress control
M9 with sucrose; no stress control
-0.3
-0.7
+0.0
-0.1
+0.1
no stress control
M9 with sucrose; no stress control
-0.5
-1.0
-0.0
+0.1
+0.5
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.5
-0.5
+0.1
+0.2
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-0.5
+0.2
-0.3
+0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.5
+0.1
-0.0
+0.5
stress
MS_media with arsenate 5 mM
+0.2
-0.6
-0.1
-0.1
+0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
+0.8
-0.1
+0.2
-0.9
stress
MS_media with arsenate 5 mM
+0.1
+0.0
+0.2
-0.4
+0.5
stress
MS_media with arsenate 5 mM
+0.2
+0.7
+0.1
-0.2
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.1
-0.1
+0.2
+1.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
+0.7
+0.1
+0.2
+0.2
no stress control
MS_media no stress control
+0.3
+0.4
-0.1
-0.1
+0.5
stress
MS_media with arsenate 5 mM
+0.3
+0.3
+0.2
-0.2
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.5
-0.1
+0.1
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
+0.4
-0.0
+0.3
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.6
+0.1
-0.2
+0.3
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.6
-0.0
+0.2
+0.6
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
+1.3
-0.1
+0.2
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.1
-0.1
+0.2
+1.5
stress
MS_media with m-arsenite 1 mM
-0.0
+0.3
+0.2
-0.3
+1.6
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.2
-0.0
+0.3
+1.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+2.3
-0.1
-0.1
+0.2
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