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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0994 and EX28DRAFT_0995 are separated by 37 nucleotides
EX28DRAFT_0995 and EX28DRAFT_0996 are separated by 275 nucleotides
EX28DRAFT_0996 and EX28DRAFT_0997 are separated by 107 nucleotides
EX28DRAFT_0997 and EX28DRAFT_0998 overlap by 10 nucleotides
EX28DRAFT_0994: EX28DRAFT_0994 - Transcriptional regulator of aromatic amino acids metabolism, at 996,804 to 998,345
_0994
EX28DRAFT_0995: EX28DRAFT_0995 - Domain of unknown function (DUF4432), at 998,383 to 999,591
_0995
EX28DRAFT_0996: EX28DRAFT_0996 - Peroxiredoxin, at 999,867 to 1,000,373
_0996
EX28DRAFT_0997: EX28DRAFT_0997 - L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily, at 1,000,481 to 1,001,446
_0997
EX28DRAFT_0998: EX28DRAFT_0998 - Predicted carboxypeptidase, at 1,001,437 to 1,002,150
_0998
Group
Condition
EX28DRAFT
_0994
EX28DRAFT
_0995
EX28DRAFT
_0996
EX28DRAFT
_0997
EX28DRAFT
_0998
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.5
-0.2
-0.4
-0.7
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.7
-0.2
-0.6
-0.9
+0.1
stress
MS_media with m-arsenite 1 mM
-0.6
-0.1
-0.3
-0.5
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
-0.2
-0.6
-0.5
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.2
-0.3
-0.3
-0.7
-0.3
stress
MS_media with arsenate 5 mM
-0.2
-0.1
-0.5
-0.5
-0.4
stress
MS_media with m-arsenite 1 mM
-0.5
-0.1
-0.3
-0.3
-0.5
stress
MS_media with arsenate 5 mM
-0.2
-0.2
-0.6
-0.2
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-0.5
-0.2
-0.1
-0.3
stress
MS_media with m-arsenite 1 mM
-0.9
-0.2
-0.1
-0.1
-0.2
stress
MS_media with m-arsenite 1 mM
-0.5
-0.1
-0.4
-0.2
-0.2
stress
MS_media with arsenate 5 mM
-0.0
-0.3
-0.5
-0.2
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.1
-0.1
+0.2
-0.8
stress
MS_media with m-arsenite 1 mM
-0.4
-0.2
-0.5
-0.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.4
-0.4
+0.0
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.3
-0.1
-0.2
-0.1
stress
MS_media with m-arsenite 1 mM
-0.3
-0.2
+0.0
+0.0
-0.7
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.3
-0.2
+0.0
+0.2
no stress control
M9 with sucrose; no stress control
-0.3
+0.1
-0.3
+0.3
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.4
+0.1
+0.3
+0.6
-1.0
no stress control
M9 with sucrose; no stress control
-0.2
-0.0
+0.4
+0.4
-1.0
no stress control
M9 with sucrose; no stress control
-0.1
+0.2
+0.3
+0.2
-0.9
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.6
+0.1
+0.5
+0.3
-0.6
no stress control
M9 with sucrose; no stress control
-0.4
+0.2
+0.3
+0.2
-0.4
no stress control
M9 with sucrose; no stress control
-0.1
+0.3
-0.3
+0.5
-0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.2
+0.3
+0.2
-0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
+0.1
+0.4
+0.4
-0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
+0.3
+0.4
+0.4
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
+0.4
+0.3
+0.4
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-0.1
+0.6
+0.7
+0.1
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