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Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0898 and EX28DRAFT_0899 overlap by 17 nucleotides
EX28DRAFT_0899 and EX28DRAFT_0900 overlap by 4 nucleotides
EX28DRAFT_0900 and EX28DRAFT_0901 overlap by 26 nucleotides
EX28DRAFT_0901 and EX28DRAFT_0902 overlap by 38 nucleotides
EX28DRAFT_0898: EX28DRAFT_0898 - holin, HP1 family, at 905,480 to 905,701
_0898
EX28DRAFT_0899: EX28DRAFT_0899 - Phage-related lysozyme (muraminidase), at 905,685 to 906,194
_0899
EX28DRAFT_0900: EX28DRAFT_0900 - phage lysis regulatory protein, LysB family, at 906,191 to 906,616
_0900
EX28DRAFT_0901: EX28DRAFT_0901 - hypothetical protein, at 906,591 to 906,749
_0901
EX28DRAFT_0902: EX28DRAFT_0902 - P2 phage tail completion protein R (GpR), at 906,712 to 907,179
_0902
Group
Condition
EX28DRAFT
_0898
EX28DRAFT
_0899
EX28DRAFT
_0900
EX28DRAFT
_0901
EX28DRAFT
_0902
no stress control
M9 with sucrose; no stress control
-0.1
N.D.
-0.0
-2.3
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
N.D.
-0.1
-1.7
+0.4
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
N.D.
-0.0
-1.0
-0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
N.D.
-0.3
-1.3
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
N.D.
-0.1
-1.0
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.4
N.D.
-0.1
-1.0
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
N.D.
-0.2
-0.8
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.3
N.D.
+0.1
-1.2
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
N.D.
-0.1
-1.3
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
N.D.
-0.1
-1.0
+0.3
stress
MS_media with m-arsenite 1 mM
-0.1
N.D.
+0.4
-1.4
+0.1
no stress control
MS_media no stress control
+0.1
N.D.
-0.4
-0.8
+0.4
no stress control
M9 with sucrose; no stress control
-0.3
N.D.
+0.2
-0.8
+0.3
no stress control
MS_media no stress control
+0.1
N.D.
+0.5
-1.3
+0.2
no stress control
MS_media no stress control
+0.4
N.D.
-0.1
-0.9
+0.5
stress
MS_media with arsenate 5 mM
+0.3
N.D.
-0.1
-0.3
+0.9
stress
MS_media with m-arsenite 1 mM
+0.3
N.D.
+0.5
-0.3
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
N.D.
-0.1
+1.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.3
N.D.
-0.2
+1.5
+0.0
stress
MS_media with arsenate 5 mM
-0.1
N.D.
+0.4
+0.7
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
N.D.
-0.0
+1.3
-0.0
stress
MS_media with arsenate 5 mM
-0.1
N.D.
+0.7
+0.5
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
N.D.
-0.2
+1.9
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
N.D.
-0.1
+2.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
N.D.
+0.3
+1.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
N.D.
+0.4
+1.7
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
N.D.
+0.5
+1.8
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
N.D.
-0.2
+2.3
+0.9
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
N.D.
+2.4
+0.9
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.7
N.D.
+1.6
+3.0
+0.1
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