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Protein
Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0802 and EX28DRAFT_0803 are separated by 9 nucleotides
EX28DRAFT_0803 and EX28DRAFT_0804 overlap by 8 nucleotides
EX28DRAFT_0804 and EX28DRAFT_0805 are separated by 2 nucleotides
EX28DRAFT_0805 and EX28DRAFT_0806 overlap by 4 nucleotides
EX28DRAFT_0802: EX28DRAFT_0802 - hypothetical protein, at 802,161 to 803,159
_0802
EX28DRAFT_0803: EX28DRAFT_0803 - Protein of avirulence locus involved in temperature-dependent protein secretion, at 803,169 to 803,981
_0803
EX28DRAFT_0804: EX28DRAFT_0804 - type VI secretion system lysozyme-like protein, at 803,974 to 804,537
_0804
EX28DRAFT_0805: EX28DRAFT_0805 - type VI secretion protein, VC_A0110 family, at 804,540 to 806,411
_0805
EX28DRAFT_0806: EX28DRAFT_0806 - type VI secretion protein, VC_A0111 family, at 806,408 to 807,451
_0806
Group
Condition
EX28DRAFT
_0802
EX28DRAFT
_0803
EX28DRAFT
_0804
EX28DRAFT
_0805
EX28DRAFT
_0806
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.0
-0.5
-4.1
+0.2
+0.3
no stress control
M9 with sucrose; no stress control
+0.2
-0.4
-1.7
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.6
+0.3
-2.2
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+0.5
-2.1
+0.2
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
+0.4
-0.9
+0.1
+0.0
stress
MS_media with m-arsenite 1 mM
+0.2
+1.0
-1.2
+0.2
+0.1
no stress control
M9 with sucrose; no stress control
+0.2
-0.6
+0.2
+0.3
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
-0.8
+0.2
+0.3
+0.3
stress
MS_media with arsenate 5 mM
-0.0
+0.6
-0.5
+0.2
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.5
-0.3
-0.3
+0.4
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
+0.6
-0.7
+0.1
+0.3
stress
MS_media with m-arsenite 1 mM
+0.6
+0.3
-0.5
+0.2
+0.3
stress
MS_media with m-arsenite 1 mM
+0.5
+0.7
-0.9
+0.4
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.6
+0.3
-0.7
+0.1
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+0.7
-0.3
+0.2
-0.1
no stress control
M9 with sucrose; no stress control
+0.4
-0.3
+0.5
+0.2
+0.2
no stress control
M9 with sucrose; no stress control
+0.5
-0.5
+0.5
+0.3
+0.3
stress
MS_media with arsenate 5 mM
-0.0
+0.5
+0.8
+0.2
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.7
+0.7
-1.0
+0.3
+0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
+0.3
+0.3
+0.1
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
-0.2
+0.8
+0.4
+0.3
stress
MS_media with m-arsenite 1 mM
+0.4
+0.4
+0.3
+0.2
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.3
-0.5
+1.1
+0.3
+0.4
stress
MS_media with arsenate 5 mM
+0.1
+0.4
+1.0
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.6
+0.8
-0.1
+0.1
+0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.7
+0.2
-0.1
+0.2
+0.8
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.7
+0.5
+0.2
+0.4
+0.1
stress
MS_media with m-arsenite 1 mM
+0.4
+0.6
+0.1
+0.3
+0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
+0.1
+0.8
+0.2
+0.4
stress
MS_media with m-arsenite 1 mM
+0.4
+0.4
+0.4
+0.3
+0.5
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