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Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0771 and EX28DRAFT_0772 are separated by 208 nucleotides
EX28DRAFT_0772 and EX28DRAFT_0773 are separated by 112 nucleotides
EX28DRAFT_0773 and EX28DRAFT_0774 are separated by 61 nucleotides
EX28DRAFT_0774 and EX28DRAFT_0775 are separated by 102 nucleotides
EX28DRAFT_0771: EX28DRAFT_0771 - Predicted glycosyltransferase, at 768,567 to 769,298
_0771
EX28DRAFT_0772: EX28DRAFT_0772 - Predicted membrane protein, at 769,507 to 769,761
_0772
EX28DRAFT_0773: EX28DRAFT_0773 - TonB-dependent siderophore receptor, at 769,874 to 771,976
_0773
EX28DRAFT_0774: EX28DRAFT_0774 - Neutral trehalase, at 772,038 to 773,723
_0774
EX28DRAFT_0775: EX28DRAFT_0775 - AraC-type DNA-binding domain-containing proteins, at 773,826 to 774,782
_0775
Group
Condition
EX28DRAFT
_0771
EX28DRAFT
_0772
EX28DRAFT
_0773
EX28DRAFT
_0774
EX28DRAFT
_0775
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.4
-1.1
+0.1
-0.0
-0.2
stress
MS_media with m-arsenite 1 mM
-0.9
-0.3
-0.1
-0.3
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
-0.7
+0.1
-0.2
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
-0.9
+0.1
+0.0
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
-1.2
+0.1
-0.2
-0.0
stress
MS_media with m-arsenite 1 mM
-1.0
-0.2
+0.0
+0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.6
+0.1
-0.2
-0.4
stress
MS_media with m-arsenite 1 mM
-0.7
+0.2
-0.2
-0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.6
+0.0
+0.0
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
-0.7
+0.2
+0.1
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.6
-0.9
+0.2
-0.2
-0.4
stress
MS_media with arsenate 5 mM
-0.1
+0.3
-0.1
-0.2
-0.4
stress
MS_media with m-arsenite 1 mM
-0.3
-0.2
-0.1
-0.2
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.5
+0.1
+0.1
-0.3
stress
MS_media with arsenate 5 mM
-0.3
+0.3
-0.2
-0.1
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
-0.3
+0.1
+0.1
-0.4
stress
MS_media with arsenate 5 mM
-0.2
-0.1
-0.1
-0.1
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
+0.2
-0.1
-0.2
-0.0
stress
MS_media with m-arsenite 1 mM
-0.4
+0.3
-0.1
-0.1
+0.0
stress
MS_media with arsenate 5 mM
-0.4
+0.0
-0.1
-0.1
+0.3
no stress control
MS_media no stress control
-0.3
+0.4
-0.0
-0.1
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.2
+0.2
-0.2
-0.3
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.5
+0.7
-0.0
-0.3
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.4
-0.5
+0.1
-0.0
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.6
+0.2
+0.1
+0.2
-0.1
stress
MS_media with m-arsenite 1 mM
-0.3
+0.5
-0.1
-0.2
+0.1
no stress control
M9 with sucrose; no stress control
+0.2
+0.2
+0.0
-0.2
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.2
+0.1
+0.1
+0.1
no stress control
M9 with sucrose; no stress control
-0.1
+0.4
+0.0
-0.2
-0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
+0.2
-0.1
-0.2
+0.3
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