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Protein
Homologs
Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0574 and EX28DRAFT_0575 overlap by 4 nucleotides
EX28DRAFT_0575 and EX28DRAFT_0576 overlap by 1 nucleotides
EX28DRAFT_0576 and EX28DRAFT_0577 are separated by 138 nucleotides
EX28DRAFT_0577 and EX28DRAFT_0578 overlap by 4 nucleotides
EX28DRAFT_0574: EX28DRAFT_0574 - Siderophore synthetase component, at 571,216 to 572,958
_0574
EX28DRAFT_0575: EX28DRAFT_0575 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 572,955 to 573,902
_0575
EX28DRAFT_0576: EX28DRAFT_0576 - Siderophore synthetase component, at 573,902 to 575,644
_0576
EX28DRAFT_0577: EX28DRAFT_0577 - Arabinose efflux permease, at 575,783 to 576,994
_0577
EX28DRAFT_0578: EX28DRAFT_0578 - Uncharacterized protein conserved in bacteria, at 576,991 to 577,788
_0578
Group
Condition
EX28DRAFT
_0574
EX28DRAFT
_0575
EX28DRAFT
_0576
EX28DRAFT
_0577
EX28DRAFT
_0578
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
-0.5
+0.1
-1.0
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.0
-0.4
-0.0
-1.0
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.2
-0.1
-0.8
-0.1
stress
MS_media with arsenate 5 mM
-0.2
-0.5
-0.4
-0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.1
-0.0
-0.7
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.3
+0.3
-0.9
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.0
-0.3
+0.2
-0.6
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.0
+0.5
-0.7
-1.0
stress
MS_media with m-arsenite 1 mM
+0.1
-0.5
-0.1
-0.2
-0.3
stress
MS_media with m-arsenite 1 mM
+0.1
-0.4
-0.1
-0.3
-0.2
stress
MS_media with m-arsenite 1 mM
-0.1
-0.2
-0.2
+0.1
-0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
-0.1
-0.0
-0.9
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.3
+0.3
-0.9
+0.1
no stress control
MS_media no stress control
-0.1
-0.1
-0.2
-0.3
+0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.1
+0.1
-0.3
-0.2
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.2
+0.0
+0.1
-0.4
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
-0.2
+0.4
-0.6
-0.2
stress
MS_media with arsenate 5 mM
+0.0
-0.5
+0.1
-0.2
-0.0
no stress control
M9 with sucrose; no stress control
-0.0
-0.3
-0.2
-0.4
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.1
+0.1
-0.6
-0.1
stress
MS_media with m-arsenite 1 mM
-0.0
-0.4
-0.1
+0.2
-0.1
stress
MS_media with arsenate 5 mM
+0.1
+0.1
-0.3
-0.3
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.0
-0.0
+0.5
-0.5
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
-0.4
+0.4
-0.3
-0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.0
+0.1
-0.5
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
-0.2
+0.6
-1.0
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.1
-0.1
+0.3
+0.3
-0.4
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.3
+0.5
-0.2
+0.5
no stress control
M9 with sucrose; no stress control
+0.3
-0.2
+0.0
+0.3
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+1.0
+0.1
-0.2
+0.3
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